6EH1 | pdb_00006eh1

Sacbrood virus of honeybee - expansion state II


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRhv_4e6eh1B1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: Rhv_4ECOD (1.6)
ACRPV_capside6eh1A1 A: beta sandwichesX: jelly-rollH: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)T: Nucleoplasmin-like/VP (viral coat and capsid proteins)F: CRPV_capsidECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
minor capsid protein MiCP -
structural protein VP3
structural protein VP2
structural protein VP1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR029053Viral coat protein subunitHomologous Superfamily
IPR001676Picornavirus capsidDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR029053Viral coat protein subunitHomologous Superfamily
IPR009003Peptidase S1, PA clanHomologous Superfamily
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
IPR044067Picornavirales 3C/3C-like protease domainDomain
IPR033703Picornavirus/Calicivirus coat proteinDomain
IPR043128Reverse transcriptase/Diguanylate cyclase domainHomologous Superfamily
IPR000199Peptidase C3A/C3B, picornaviralDomain
IPR014759Helicase, superfamily 3, single-stranded RNA virusDomain
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
IPR000605Helicase, superfamily 3, single-stranded DNA/RNA virusDomain
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily