6EFF | pdb_00006eff

NCTC10712

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	EUF07771	e6effD2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07771	ECOD (1.6)
D	Rib	e6effD1	A: a+b two layers	X: a+b domain in platelet binding protein GspB (From Topology)	H: a+b domain in platelet binding protein GspB (From Topology)	T: a+b domain in platelet binding protein GspB	F: Rib	ECOD (1.6)
C	EUF07771	e6effC1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07771	ECOD (1.6)
C	Rib	e6effC2	A: a+b two layers	X: a+b domain in platelet binding protein GspB (From Topology)	H: a+b domain in platelet binding protein GspB (From Topology)	T: a+b domain in platelet binding protein GspB	F: Rib	ECOD (1.6)
B	EUF07771	e6effB1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07771	ECOD (1.6)
B	Rib	e6effB2	A: a+b two layers	X: a+b domain in platelet binding protein GspB (From Topology)	H: a+b domain in platelet binding protein GspB (From Topology)	T: a+b domain in platelet binding protein GspB	F: Rib	ECOD (1.6)
A	EUF07771	e6effA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07771	ECOD (1.6)
A	Rib	e6effA1	A: a+b two layers	X: a+b domain in platelet binding protein GspB (From Topology)	H: a+b domain in platelet binding protein GspB (From Topology)	T: a+b domain in platelet binding protein GspB	F: Rib	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Provenance Source (Version)
D	3.10.20.890	Alpha Beta	Roll	Ubiquitin-like (UB roll)	CATH (utative)
C	3.10.20.890	Alpha Beta	Roll	Ubiquitin-like (UB roll)	CATH (utative)
B	3.10.20.890	Alpha Beta	Roll	Ubiquitin-like (UB roll)	CATH (utative)
A	3.10.20.890	Alpha Beta	Roll	Ubiquitin-like (UB roll)	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	NCTC10712 Siglec	cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR044024	Atypical Rib domain	Domain
A, B, C, D	IPR046785	SrpA-like, SigLec-like domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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