GspB Siglec + Unique domains
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | DUF4625_like | e6efaA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: DUF4625_like | ECOD (1.6) |
| A | Rib | e6efaA2 | A: a+b two layers | X: a+b domain in platelet binding protein GspB (From Topology) | H: a+b domain in platelet binding protein GspB (From Topology) | T: a+b domain in platelet binding protein GspB | F: Rib | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.4140 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (utative) | |
| A | 3.10.20.890 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Platelet binding protein GspB | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR026465 | Serine-rich repeat adhesion glycoprotein, N-terminal domain | Domain | |
| IPR022263 | KxYKxGKxW signal peptide | Conserved Site | |
| IPR044024 | Atypical Rib domain | Domain | |
| IPR050252 | Beta/Gamma-Crystallin | Family | |
| IPR019931 | LPXTG cell wall anchor domain | Domain |
