6EBY | pdb_00006eby

Crystal structure of the MbtH-like protein FscK bound to the interface forming region of FscH adenylation domain from Thermobifida fusca

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6ebyc_	Alpha and beta proteins (a+b)	MbtH/L9 domain-like	MbtH-like	automated matches	automated matches	(Thermobifida fusca YX ) [TaxId: 269800 ],	SCOPe (2.08)
A	d6ebya_	Alpha and beta proteins (a+b)	MbtH/L9 domain-like	MbtH-like	automated matches	automated matches	(Thermobifida fusca YX ) [TaxId: 269800 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Hydrolase	e6ebyC1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: Hydrolase	ECOD (v294.1)
A	TSP_1	e6ebyA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Ntn	T: Proteasome subunits	F: TSP_1	ECOD (v294.1)
D	Hydrolase	e6ebyD1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: DUF1107-like	T: DUF1107-like	F: Hydrolase	ECOD (v294.1)
B	TSP_1	e6ebyB1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Ntn	T: Proteasome subunits	F: TSP_1	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.90.820.10	Alpha Beta	Alpha-Beta Complex	Rubredoxin-like	Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id	CATH (utative)
A	3.90.820.10	Alpha Beta	Alpha-Beta Complex	Rubredoxin-like	Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id	CATH (utative)
D	2.30.38.10	Mainly Beta	Roll	Luciferase	domain 3	CATH (utative)
B	2.30.38.10	Mainly Beta	Roll	Luciferase	domain 3	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C	Conserved protein MbtH	-	siderophore biosynthetic process peptide biosynthetic process biosynthetic process secondary metabolite biosynthetic process siderophore metabolic process metabolic process cellular process nonribosomal peptide biosynthetic process peptide metabolic process secondary metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
B, D	Amino acid adenylation	vitamin binding modified amino acid binding binding ion binding anion binding phosphopantetheine binding sulfur compound binding small molecule binding catalytic activity	secondary metabolite biosynthetic process biosynthetic process metabolic process cellular process secondary metabolic process lipid biosynthetic process primary metabolic process lipid metabolic process amino acid activation peptide biosynthetic process amino acid activation for nonribosomal peptide biosynthetic process amino acid metabolic process nonribosomal peptide biosynthetic process peptide metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C	IPR038020	MbtH-like domain superfamily	Homologous Superfamily
A, C	IPR037407	MbtH-like protein	Family
A, C	IPR005153	MbtH-like domain	Domain
B, D	IPR006162	Phosphopantetheine attachment site	PTM
B, D	IPR009081	Phosphopantetheine binding ACP domain	Domain
B, D	IPR020806	Polyketide synthase-like, phosphopantetheine-binding domain	Domain
B, D	IPR045851	AMP-binding enzyme domain superfamily	Homologous Superfamily
B, D	IPR010071	Amino acid adenylation domain	Domain
B, D	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily
B, D	IPR023213	Chloramphenicol acetyltransferase-like domain superfamily	Homologous Superfamily
B, D	IPR001242	Condensation domain	Domain
B, D	IPR036736	ACP-like superfamily	Homologous Superfamily
B, D	IPR025110	AMP-binding enzyme, C-terminal domain	Domain
B, D	IPR000873	AMP-dependent synthetase/ligase domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.