6DJ4 | pdb_00006dj4

Crystal Structure of Bacillus thuringiensis Cry1A.105 Tryptic Core

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6dj4a3	All beta proteins	Galactose-binding domain-like	Galactose-binding domain-like	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ], (Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
A	d6dj4a2	All beta proteins	beta-Prism I	delta-Endotoxin (insectocide), middle domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ], (Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)
A	d6dj4a1	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	delta-Endotoxin (insectocide), N-terminal domain	automated matches	automated matches	(Bacillus thuringiensis ) [TaxId: 1428 ], (Bacillus thuringiensis ) [TaxId: 1428 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	delta-endotoxin, c-terminal domain	8099091	4002480	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	galactose-binding domain-like	8099092	3000087	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	SBP_bac_1	e6dj4A1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: ADP-ribosylation	T: ADP-ribosylation	F: SBP_bac_1	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.190.10	Mainly Alpha	Up-down Bundle	Delta-Endotoxin	domain 1	CATH (4.3.0)
A	2.60.120.260	Mainly Beta	Sandwich	Jelly Rolls	Galactose-binding domain-like	CATH (4.3.0)
A	2.100.10.10	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Pesticidal crystal protein, central domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Cry1A.105	protein binding binding signaling receptor binding toxin activity	sporulation resulting in formation of a cellular spore developmental process anatomical structure morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development sporulation biological process involved in interspecies interaction between organisms cellular process disruption of cell in another organism disruption of anatomical structure in another organism symbiont-mediated killing of host cell killing of cells of another organism cell killing biological process involved in interaction with host sporulation resulting in formation of a cellular spore developmental process anatomical structure morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development sporulation biological process involved in interspecies interaction between organisms cellular process disruption of cell in another organism disruption of anatomical structure in another organism symbiont-mediated killing of host cell killing of cells of another organism cell killing biological process involved in interaction with host biological process involved in symbiotic interaction	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001178	Pesticidal crystal protein, domain II	Domain
A	IPR036399	Pesticidal crystal protein, central domain superfamily	Homologous Superfamily
A	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A	IPR038979	Pesticidal crystal protein	Family
A	IPR005639	Pesticidal crystal protein, domain I	Domain
A	IPR048645	Cry1Ac-like, domain VII	Domain
A	IPR041587	Pesticidal crystal protein Cry, domain V	Domain
A	IPR005638	Pesticidal crystal protein, domain III	Domain
A	IPR036716	Pesticidal crystal protein, N-terminal domain superfamily	Homologous Superfamily
A	IPR054544	Pesticidal crystal protein Cry1Aa, domain IV	Domain
A	IPR001178	Pesticidal crystal protein, domain II	Domain
A	IPR036399	Pesticidal crystal protein, central domain superfamily	Homologous Superfamily
A	IPR008979	Galactose-binding-like domain superfamily	Homologous Superfamily
A	IPR038979	Pesticidal crystal protein	Family
A	IPR005639	Pesticidal crystal protein, domain I	Domain
A	IPR048645	Cry1Ac-like, domain VII	Domain
A	IPR041587	Pesticidal crystal protein Cry, domain V	Domain
A	IPR005638	Pesticidal crystal protein, domain III	Domain
A	IPR036716	Pesticidal crystal protein, N-terminal domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.