6DC0 | pdb_00006dc0

Tribbles (TRIB1) pseudokinase fused to CCAAT-enhancer binding protein (C/EBPalpha) degron

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Protein kinase-like (PK-like)	8076789	3000066	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Protein kinase-like (PK-like)	8076789	3000066	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PP-binding	e6dc0B1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: ADP-ribosylation	T: ADP-ribosylation	F: PP-binding	ECOD (v294.1)
A	Anoctamin	e6dc0A1	A: a/b three-layered sandwiches	X: PriB N-terminal domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Anoctamin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.200.20	Alpha Beta	2-Layer Sandwich	Phosphorylase Kinase	domain 1	CATH (utative)
B	1.10.510.10	Mainly Alpha	Orthogonal Bundle	Transferase(Phosphotransferase)	domain 1	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00069	Protein kinase domain (Pkinase)	Protein kinase domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Tribbles homolog 1,CCAAT/enhancer-binding protein alpha	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding protein binding DNA-binding transcription factor binding STAT family protein binding histone deacetylase binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding protein binding DNA-binding transcription factor binding STAT family protein binding histone deacetylase binding enzyme binding RNA polymerase I transcription regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity protein-containing complex binding HMG box domain binding protein domain specific binding DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription activator activity identical protein binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding RNA polymerase II cis-regulatory region sequence-specific DNA binding protein heterodimerization activity protein dimerization activity kinase binding protein homodimerization activity chromatin binding chromatin DNA binding enzyme regulator activity protein kinase inhibitor activity molecular function inhibitor activity molecular function regulator activity enzyme inhibitor activity protein kinase regulator activity kinase inhibitor activity kinase regulator activity transcription regulator inhibitor activity protein kinase binding mitogen-activated protein kinase kinase binding ubiquitin-protein transferase regulator activity ubiquitin protein ligase binding ubiquitin-like protein ligase binding	developmental process stem cell proliferation cell population proliferation cellular developmental process hemopoiesis cell differentiation anatomical structure development hematopoietic stem cell proliferation cell development cellular process cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway developmental process stem cell proliferation cell population proliferation cellular developmental process hemopoiesis cell differentiation anatomical structure development hematopoietic stem cell proliferation cell development cellular process cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation response to cytokine cytokine-mediated signaling pathway cell communication response to peptide response to chemical cellular response to cytokine stimulus signal transduction cellular response to metal ion cellular response to chemical stimulus response to lithium ion cellular response to lithium ion response to metal ion regulation of defense response regulation of response to external stimulus defense response positive regulation of biological process response to external stimulus regulation of inflammatory response positive regulation of response to stimulus positive regulation of response to external stimulus positive regulation of inflammatory response regulation of response to stimulus regulation of response to stress response to stress positive regulation of defense response inflammatory response multicellular organismal process regulation of stem cell proliferation negative regulation of hematopoietic stem cell proliferation regulation of developmental process negative regulation of biological process regulation of cell differentiation regulation of cell development multicellular organism development negative regulation of stem cell proliferation negative regulation of cellular process regulation of immune system process regulation of multicellular organismal process negative regulation of cell differentiation negative regulation of hemopoiesis regulation of multicellular organismal development negative regulation of cell population proliferation negative regulation of developmental process negative regulation of cell development negative regulation of immune system process immune system process regulation of cell population proliferation regulation of hemopoiesis regulation of hematopoietic stem cell proliferation negative regulation of multicellular organismal process regulation of biosynthetic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process positive regulation of macromolecule biosynthetic process regulation of gene expression positive regulation of metabolic process biosynthetic process positive regulation of gene expression positive regulation of biosynthetic process regulation of macromolecule biosynthetic process metabolic process positive regulation of macromolecule metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular process ear development sensory organ development inner ear development animal organ development response to vitamin B2 response to nutrient levels response to nutrient response to oxygen-containing compound response to nitrogen compound response to vitamin negative regulation of cell cycle cell cycle regulation of cell cycle myeloid leukocyte differentiation granulocyte differentiation myeloid cell differentiation leukocyte differentiation behavior system process learning or memory nervous system process cognition memory positive regulation of proteasomal protein catabolic process catabolic process positive regulation of protein metabolic process proteasome-mediated ubiquitin-dependent protein catabolic process regulation of ubiquitin-dependent protein catabolic process macromolecule catabolic process regulation of primary metabolic process positive regulation of ubiquitin-dependent protein catabolic process modification-dependent macromolecule catabolic process protein metabolic process regulation of protein metabolic process primary metabolic process proteasomal protein catabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process regulation of proteasomal ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process regulation of proteasomal protein catabolic process positive regulation of proteasomal ubiquitin-dependent protein catabolic process ubiquitin-dependent protein catabolic process regulation of protein catabolic process RNA metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process response to ketone response to lipid response to endogenous stimulus response to glucocorticoid response to corticosteroid response to hormone response to steroid hormone response to dexamethasone regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of DNA-templated transcription acute-phase response acute inflammatory response fat cell differentiation fat cell proliferation white fat cell proliferation brown fat cell differentiation cellular response to xenobiotic stimulus response to xenobiotic stimulus integrated stress response signaling intracellular signal transduction cellular response to stress intracellular signaling cassette negative regulation of RNA biosynthetic process transcription by RNA polymerase II negative regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process regulation of transcription by RNA polymerase II negative regulation of DNA-templated transcription negative regulation of transcription by RNA polymerase II negative regulation of metabolic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of RNA metabolic process positive regulation of fat cell differentiation positive regulation of developmental process positive regulation of cell differentiation regulation of fat cell differentiation Notch signaling pathway positive regulation of DNA-templated transcription positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process epithelium development developmental maturation tissue development epithelial cell differentiation epithelial cell development anatomical structure maturation epithelial cell maturation cell maturation chemical homeostasis homeostatic process glucose homeostasis carbohydrate homeostasis nitrogen cycle metabolic process urea cycle small molecule metabolic process urea metabolic process white fat cell differentiation hepaticobiliary system development gland development liver development system development regulation of macrophage activation positive regulation of macrophage activation regulation of leukocyte activation cell activation regulation of cell activation myeloid leukocyte activation leukocyte activation macrophage activation positive regulation of cell activation positive regulation of leukocyte activation positive regulation of multicellular organismal process positive regulation of immune system process lipid homeostasis tube development respiratory tube development lung development respiratory system development multicellular organismal-level homeostasis energy homeostasis generation of precursor metabolites and energy secondary alcohol metabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process alcohol metabolic process lipid metabolic process placenta development chordate embryonic development embryo development in utero embryonic development embryonic placenta development embryo development ending in birth or egg hatching embryonic organ development osteoblast development ossification osteoblast differentiation cellular response to tumor necrosis factor response to tumor necrosis factor interleukin-6-mediated signaling pathway response to interleukin-6 cellular response to interleukin-6 macrophage differentiation mononuclear cell differentiation regulation of DNA-templated transcription initiation DNA-templated transcription initiation positive regulation of DNA-templated transcription initiation regulation of osteoblast differentiation positive regulation of osteoblast differentiation transcription by RNA polymerase I response to phenylpropanoid animal organ regeneration regeneration cellular component organization organelle organization cellular component organization or biogenesis mitochondrion organization negative regulation of locomotion regulation of cell motility regulation of smooth muscle cell migration smooth muscle cell migration muscle cell migration negative regulation of smooth muscle cell migration regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility locomotion negative regulation of cell migration regulation of smooth muscle cell proliferation smooth muscle cell proliferation negative regulation of smooth muscle cell proliferation muscle cell proliferation negative regulation of signaling negative regulation of intracellular signal transduction regulation of signal transduction negative regulation of cell communication negative regulation of JNK cascade regulation of intracellular signal transduction JNK cascade regulation of signaling negative regulation of response to stimulus regulation of JNK cascade regulation of MAPK cascade negative regulation of signal transduction MAPK cascade regulation of cell communication negative regulation of MAPK cascade regulation of leukocyte differentiation regulation of granulocyte differentiation regulation of eosinophil differentiation positive regulation of hemopoiesis regulation of myeloid cell differentiation positive regulation of cell development regulation of myeloid leukocyte differentiation positive regulation of myeloid leukocyte differentiation eosinophil differentiation positive regulation of myeloid cell differentiation positive regulation of eosinophil differentiation positive regulation of granulocyte differentiation positive regulation of leukocyte differentiation regulation of protein modification process regulation of catalytic activity regulation of protein phosphorylation regulation of transferase activity regulation of MAP kinase activity phosphate-containing compound metabolic process phosphorus metabolic process protein modification process protein phosphorylation phosphorylation regulation of protein kinase activity regulation of molecular function regulation of kinase activity regulation of protein serine/threonine kinase activity macromolecule modification regulation of phosphorylation regulation of phosphorus metabolic process regulation of lipopolysaccharide-mediated signaling pathway negative regulation of lipopolysaccharide-mediated signaling pathway regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms negative regulation of response to biotic stimulus cellular response to lipopolysaccharide response to biotic stimulus lipopolysaccharide-mediated signaling pathway cellular response to biotic stimulus response to bacterium response to external biotic stimulus response to other organism cellular response to molecule of bacterial origin response to lipopolysaccharide cellular response to oxygen-containing compound negative regulation of response to external stimulus cellular response to lipid response to molecule of bacterial origin regulation of neutrophil differentiation negative regulation of neutrophil differentiation negative regulation of leukocyte differentiation negative regulation of myeloid cell differentiation negative regulation of myeloid leukocyte differentiation negative regulation of granulocyte differentiation neutrophil differentiation regulation of macrophage differentiation positive regulation of macrophage differentiation	protein-containing complex transcription regulator complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle protein-containing complex transcription regulator complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen organelle lumen nuclear lumen nuclear matrix nucleolus RNA polymerase II transcription regulator complex nuclear protein-containing complex CHOP-C/EBP complex nucleoplasm C/EBP complex Rb-E2F complex cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR031106	CCAAT/enhancer-binding protein C/EBP	Family
A, B	IPR004827	Basic-leucine zipper domain	Domain
A, B	IPR016468	CCAAT/enhancer-binding protein, chordates	Family
A, B	IPR046347	Basic-leucine zipper domain superfamily	Homologous Superfamily
A, B	IPR024105	Tribbles homologue 1, pseudokinase domain	Domain
A, B	IPR024104	Pseudokinase tribbles family/serine-threonine-protein kinase 40	Family
A, B	IPR000719	Protein kinase domain	Domain
A, B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q96RU8	acute myeloid leukemia squamous cell carcinoma acute promyelocytic leukemia obesity disorder female infertility skin cancer ulcerative colitis pulmonary fibrosis head and neck cancer skin neoplasm Neoplasms, Radiation-Induced glioblastoma head and neck neoplasm hematopoietic and lymphoid system neoplasm type 2 diabetes mellitus acute myeloid leukemia squamous cell carcinoma acute promyelocytic leukemia obesity disorder female infertility skin cancer ulcerative colitis pulmonary fibrosis head and neck cancer skin neoplasm Neoplasms, Radiation-Induced glioblastoma head and neck neoplasm hematopoietic and lymphoid system neoplasm type 2 diabetes mellitus inborn carbohydrate metabolic disorder invasive ductal breast carcinoma lung adenocarcinoma malignant tumor of neck astrocytic tumor myopathy cancer non-alcoholic fatty liver disease congenital anemia precancerous condition pulmonary emphysema hepatocellular carcinoma inflammatory bowel disease lung cancer allergic rhinitis medulloblastoma breast carcinoma neoplasm of neck Crohn disease ductal breast carcinoma in situ hematologic disease tuberculosis idiopathic interstitial pneumonia interstitial cystitis malignant mesothelioma asthma myelodysplastic syndrome breast fibroadenoma Emery-Dreifuss muscular dystrophy psoriasis coronary artery disease non-alcoholic fatty liver disease lung cancer MALT lymphoma myocardial infarction non-small cell lung carcinoma abdominal aortic aneurysm polycystic ovary syndrome adrenal cortex carcinoma ulcerative colitis Barrett esophagus Coronary Arteriosclerosis dermatomyositis heart disease interstitial lung disease lung large cell carcinoma metabolic disease nephrosclerosis osteosarcoma adenoma rheumatoid arthritis astrocytic tumor breast cancer esophageal adenocarcinoma inflammatory bowel disease large cell medulloblastoma lymphoplasmacytic lymphoma metabolic syndrome X ovarian cancer adrenal cortex adenoma sinusitis B-cell chronic lymphocytic leukemia congestive heart failure Crohn disease glioblastoma interstitial cystitis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.