6D8A | pdb_00006d8a

RsAgo Ternary Complex with guide RNA and Target DNA Containing A-A Bulge Within the Seed Segment of the Target Strand

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth F]Anoctamine6d8aF1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: AnoctaminECOD (v294.1)
Ae6d8aA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: ADP-ribosylationT: ADP-ribosylationF:ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D [auth F]3.30.420.10 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (utative)
A3.30.420.10 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth G],
F [auth J]		DNA (5'-D(P*TP*CP*GP*TP*CP*AP*CP*CP*TP*GP*TP*GP*CP*AP*GP*AP*AP*TP*AP*AP*C)-3')---
B [auth C],
E [auth H]		RNA (5'-R(P*UP*UP*AP*CP*UP*GP*CP*AP*CP*AP*GP*GP*UP*GP*AP*CP*GP*A)-3')---
A,
D [auth F]		Uncharacterized protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
D [auth F]		IPR036397Ribonuclease H superfamilyHomologous Superfamily
A,
D [auth F]		IPR003165Piwi domainDomain
A,
D [auth F]		IPR012337Ribonuclease H-like superfamilyHomologous Superfamily