Annotations: 6CRI

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
W [auth b]	SCOP2B Superfamily	SNARE-like	8082711	3001113	SCOP2B (2022-06-29)
O [auth a]	SCOP2B Superfamily	SNARE-like	8082711	3001113	SCOP2B (2022-06-29)
G [auth S]	SCOP2B Superfamily	SNARE-like	8082711	3001113	SCOP2B (2022-06-29)
V [auth X]	SCOP2B Superfamily	mu adaptin domain-like	8083652	3000810	SCOP2B (2022-06-29)
N [auth W]	SCOP2B Superfamily	mu adaptin domain-like	8083652	3000810	SCOP2B (2022-06-29)
F [auth M]	SCOP2B Superfamily	mu adaptin domain-like	8083652	3000810	SCOP2B (2022-06-29)
T [auth R]	SCOP2B Superfamily	ARM repeat-like	8078176	3000116	SCOP2B (2022-06-29)
L [auth Q]	SCOP2B Superfamily	ARM repeat-like	8078176	3000116	SCOP2B (2022-06-29)
D [auth G]	SCOP2B Superfamily	ARM repeat-like	8078176	3000116	SCOP2B (2022-06-29)
U [auth V]	SCOP2B Superfamily	Ras-like P-loop GTPases	8089848	3002022	SCOP2B (2022-06-29)
S [auth L]	SCOP2B Superfamily	Ras-like P-loop GTPases	8089848	3002022	SCOP2B (2022-06-29)
M [auth U]	SCOP2B Superfamily	Ras-like P-loop GTPases	8089848	3002022	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Ras-like P-loop GTPases	8089848	3002022	SCOP2B (2022-06-29)
E [auth H]	SCOP2B Superfamily	Ras-like P-loop GTPases	8089848	3002022	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ras-like P-loop GTPases	8089848	3002022	SCOP2B (2022-06-29)
R [auth J]	SCOP2B Superfamily	ARM repeat-like	8082787	3000116	SCOP2B (2022-06-29)
J [auth I]	SCOP2B Superfamily	ARM repeat-like	8082787	3000116	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	ARM repeat-like	8082787	3000116	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
W [auth b]	Clat_adaptor_s	e6crib1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Clat_adaptor_s	ECOD (1.6)
O [auth a]	Clat_adaptor_s	e6cria1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Clat_adaptor_s	ECOD (1.6)
G [auth S]	Clat_adaptor_s	e6criS1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Clat_adaptor_s	ECOD (1.6)
V [auth X]	Adap_comp_sub_2nd	e6criX3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Adap_comp_sub_2nd	ECOD (1.6)
V [auth X]	Adap_comp_sub_2nd,Adap_comp_sub_1st	e6criX2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Adap_comp_sub_2nd,Adap_comp_sub_1st	ECOD (1.6)
V [auth X]	Clat_adaptor_s	e6criX1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Clat_adaptor_s	ECOD (1.6)
N [auth W]	Adap_comp_sub_2nd	e6criW2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Adap_comp_sub_2nd	ECOD (1.6)
N [auth W]	Adap_comp_sub_2nd,Adap_comp_sub_1st	e6criW3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Adap_comp_sub_2nd,Adap_comp_sub_1st	ECOD (1.6)
N [auth W]	Clat_adaptor_s	e6criW1	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Clat_adaptor_s	ECOD (1.6)
F [auth M]	Adap_comp_sub_2nd	e6criM1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Adap_comp_sub_2nd	ECOD (1.6)
F [auth M]	Adap_comp_sub_2nd,Adap_comp_sub_1st	e6criM3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Common fold of diphtheria toxin/transcription factors/cytochrome f	F: Adap_comp_sub_2nd,Adap_comp_sub_1st	ECOD (1.6)
F [auth M]	Clat_adaptor_s	e6criM2	A: a+b three layers	X: Profilin-like	H: profilin-like (From Topology)	T: profilin-like	F: Clat_adaptor_s	ECOD (1.6)
T [auth R]	Adaptin_N	e6criR1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Adaptin_N	ECOD (1.6)
L [auth Q]	Adaptin_N	e6criQ1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Adaptin_N	ECOD (1.6)
D [auth G]	Adaptin_N	e6criG1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Adaptin_N	ECOD (1.6)
U [auth V]	Ras	e6criV1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Ras	ECOD (1.6)
S [auth L]	Ras	e6criL1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Ras	ECOD (1.6)
M [auth U]	Ras	e6criU1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Ras	ECOD (1.6)
K	Ras	e6criK1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Ras	ECOD (1.6)
E [auth H]	Ras	e6criH1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Ras	ECOD (1.6)
C	Ras	e6criC1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: Ras	ECOD (1.6)
R [auth J]	Adaptin_N	e6criJ1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Adaptin_N	ECOD (1.6)
J [auth I]	Adaptin_N	e6criI1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Adaptin_N	ECOD (1.6)
B	Adaptin_N	e6criB1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: Adaptin_N	ECOD (1.6)
X [auth Z]	F-protein	e6criZ1	A: a+b three layers	X: Regulatory factor Nef (From Topology)	H: Regulatory factor Nef (From Topology)	T: Regulatory factor Nef	F: F-protein	ECOD (1.6)
P [auth Y]	F-protein	e6criY1	A: a+b three layers	X: Regulatory factor Nef (From Topology)	H: Regulatory factor Nef (From Topology)	T: Regulatory factor Nef	F: F-protein	ECOD (1.6)
H [auth N]	F-protein	e6criN1	A: a+b three layers	X: Regulatory factor Nef (From Topology)	H: Regulatory factor Nef (From Topology)	T: Regulatory factor Nef	F: F-protein	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
G [auth S], O [auth a], W [auth b]	PF01217	Clathrin adaptor complex small chain (Clat_adaptor_s)	Clathrin adaptor complex small chain		Domain
F [auth M], N [auth W], V [auth X]	PF01217	Clathrin adaptor complex small chain (Clat_adaptor_s)	Clathrin adaptor complex small chain		Domain
F [auth M], N [auth W], V [auth X]	PF00928	Adaptor complexes medium subunit family (Adap_comp_sub)	Adaptor complexes medium subunit family	-	Family
D [auth G], L [auth Q], T [auth R]	PF01602	Adaptin N terminal region (Adaptin_N)	Adaptin N terminal region	-	Repeat
C, E [auth H], K, M [auth U], S [auth L], C, E [auth H], K, M [auth U], S [auth L], U [auth V]	PF00025	ADP-ribosylation factor family (Arf)	ADP-ribosylation factor family	Pfam combines a number of different Prosite families together	Domain
B, J [auth I], R [auth J]	PF01602	Adaptin N terminal region (Adaptin_N)	Adaptin N terminal region	-	Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G [auth S], O [auth a], W [auth b]	AP-1 complex subunit sigma-3	cargo adaptor activity clathrin adaptor activity protein-macromolecule adaptor activity molecular adaptor activity	cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport organelle assembly cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport organelle assembly cellular pigmentation pigment granule organization vesicle organization cellular component organization cellular component biogenesis melanosome organization organelle organization pigmentation cellular component assembly cellular component organization or biogenesis melanosome assembly protein targeting vesicle-mediated transport platelet dense granule organization secretory granule organization endomembrane system organization	membrane-bounded organelle intracellular anatomical structure membrane intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle membrane cellular anatomical structure vesicle membrane cytoplasmic vesicle organelle cytoplasm vesicle organelle membrane membrane-bounded organelle intracellular anatomical structure membrane intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle membrane cellular anatomical structure vesicle membrane cytoplasmic vesicle organelle cytoplasm vesicle organelle membrane early endosome endosome endomembrane system clathrin-coated pit vacuolar membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane lysosome Golgi membrane Golgi apparatus cytosol Golgi apparatus subcompartment organelle subcompartment trans-Golgi network membrane trans-Golgi network protein-containing complex vesicle coat membrane protein complex transport vesicle membrane clathrin coat of trans-Golgi network vesicle membrane coat trans-Golgi network transport vesicle membrane trans-Golgi network transport vesicle AP-type membrane coat adaptor complex AP-1 adaptor complex clathrin-coated vesicle clathrin vesicle coat coated vesicle Golgi-associated vesicle clathrin-coated vesicle membrane transport vesicle coated membrane clathrin coat coated vesicle membrane Golgi-associated vesicle membrane clathrin adaptor complex
F [auth M], N [auth W], V [auth X]	AP-1 complex subunit mu-1	-	cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport organelle assembly cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport organelle assembly cellular pigmentation pigment granule organization vesicle organization cellular component organization cellular component biogenesis melanosome organization organelle organization pigmentation cellular component assembly cellular component organization or biogenesis melanosome assembly vesicle-mediated transport platelet dense granule organization secretory granule organization endomembrane system organization cellular response to stimulus pigment cell differentiation response to stimulus cellular developmental process developmental pigmentation endosome to pigment granule transport cell differentiation cellular pigment accumulation developmental process endosome to melanosome transport pigment accumulation response to external stimulus developmental maturation pigment granule maturation	membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle vacuolar membrane membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle vacuolar membrane membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome Golgi apparatus subcompartment Golgi apparatus organelle subcompartment trans-Golgi network synapse cell junction cytosol trans-Golgi network membrane protein-containing complex vesicle coat membrane protein complex transport vesicle membrane clathrin coat of trans-Golgi network vesicle membrane coat trans-Golgi network transport vesicle membrane trans-Golgi network transport vesicle AP-type membrane coat adaptor complex AP-1 adaptor complex vesicle membrane clathrin-coated vesicle clathrin vesicle coat coated vesicle Golgi-associated vesicle clathrin-coated vesicle membrane transport vesicle coated membrane clathrin coat coated vesicle membrane cytoplasmic vesicle membrane Golgi-associated vesicle membrane clathrin adaptor complex
D [auth G], L [auth Q], T [auth R]	AP-1 complex subunit gamma-1	-	cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport organelle assembly cellular localization establishment of protein localization nitrogen compound transport transport intracellular transport establishment of localization localization protein transport establishment of localization in cell macromolecule localization cellular process intracellular protein localization intracellular protein transport organelle assembly cellular pigmentation pigment granule organization vesicle organization cellular component organization cellular component biogenesis melanosome organization organelle organization pigmentation cellular component assembly cellular component organization or biogenesis melanosome assembly secretion basolateral protein secretion establishment of protein localization to extracellular region export from cell protein secretion protein localization to extracellular region secretion by cell vesicle-mediated transport platelet dense granule organization secretory granule organization endomembrane system organization	membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle clathrin-coated pit membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure cytoplasmic vesicle organelle cytoplasm vesicle clathrin-coated pit membrane vacuolar membrane lytic vacuole vacuole lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome Golgi apparatus subcompartment Golgi apparatus organelle subcompartment trans-Golgi network clathrin-coated vesicle coated vesicle trans-Golgi network membrane protein-containing complex vesicle coat membrane protein complex transport vesicle membrane clathrin coat of trans-Golgi network vesicle membrane coat trans-Golgi network transport vesicle membrane trans-Golgi network transport vesicle AP-type membrane coat adaptor complex AP-1 adaptor complex vesicle membrane clathrin vesicle coat Golgi-associated vesicle clathrin-coated vesicle membrane transport vesicle coated membrane clathrin coat coated vesicle membrane cytoplasmic vesicle membrane Golgi-associated vesicle membrane clathrin adaptor complex perinuclear region of cytoplasm presynapse synapse cell junction
C, E [auth H], K, M [auth U], S [auth L], C, E [auth H], K, M [auth U], S [auth L], U [auth V]	ADP-ribosylation factor 1	protein binding binding protein domain specific binding RNA binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding protein binding binding protein domain specific binding RNA binding nucleic acid binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding magnesium ion binding metal ion binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	inorganic ion homeostasis homeostatic process intracellular copper ion homeostasis copper ion homeostasis cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis regulation of localization import into cell regulation of biological process inorganic ion homeostasis homeostatic process intracellular copper ion homeostasis copper ion homeostasis cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis regulation of localization import into cell regulation of biological process regulation of cellular process regulation of cellular component organization receptor internalization regulation of transport transport regulation of receptor-mediated endocytosis biological regulation regulation of vesicle-mediated transport regulation of receptor internalization establishment of localization vesicle-mediated transport cellular component organization localization cellular process cellular component organization or biogenesis endocytosis receptor-mediated endocytosis regulation of endocytosis cellular localization establishment of protein localization nitrogen compound transport intracellular transport protein transport establishment of localization in cell macromolecule localization intracellular protein localization intracellular protein transport cell junction organization dendritic spine organization postsynapse organization plasma membrane bounded cell projection organization cell projection organization neuron projection organization synapse organization negative regulation of signaling signaling modulation of chemical synaptic transmission negative regulation of biological process negative regulation of synaptic transmission negative regulation of cell communication cell communication synaptic signaling negative regulation of cellular process regulation of biological quality regulation of synaptic plasticity trans-synaptic signaling regulation of signaling cell-cell signaling chemical synaptic transmission regulation of trans-synaptic signaling long-term synaptic depression anterograde trans-synaptic signaling regulation of cell communication membrane organization cytoskeleton-dependent cytokinesis mitotic cytokinetic process cleavage furrow ingression mitotic cytokinesis cytokinesis mitotic cleavage furrow ingression mitotic cell cycle mitotic cell cycle process cytokinetic process membrane invagination cell cycle cell division plasma membrane invagination cell cycle process regulation of Arp2/3 complex-mediated actin nucleation regulation of cytoskeleton organization regulation of actin filament-based process regulation of actin nucleation actin filament-based process regulation of actin filament organization actin cytoskeleton organization actin filament organization Arp2/3 complex-mediated actin nucleation regulation of organelle organization organelle organization regulation of actin cytoskeleton organization regulation of supramolecular fiber organization actin nucleation supramolecular fiber organization cytoskeleton organization cellular response to virus biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure cytoplasm cytosol cell leading edge cell periphery plasma membrane membrane protein-containing complex cell projection neuron projection plasma membrane bounded cell projection intracellular membraneless organelle sarcomere intracellular organelle membraneless organelle contractile muscle fiber supramolecular fiber myofibril supramolecular polymer supramolecular complex Golgi membrane Golgi apparatus intracellular membrane-bounded organelle endomembrane system bounding membrane of organelle organelle membrane postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse asymmetric synapse
B, J [auth I], R [auth J]	AP-1 complex subunit beta-1	clathrin binding protein binding binding kinase binding enzyme binding protein kinase binding	developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development establishment of protein localization nitrogen compound transport transport secretion basolateral protein secretion establishment of protein localization to extracellular region developmental process heart development multicellular organism development multicellular organismal process anatomical structure development animal organ development circulatory system development system development establishment of protein localization nitrogen compound transport transport secretion basolateral protein secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization determination of bilateral symmetry pattern specification process determination of left/right symmetry left/right pattern formation regionalization specification of symmetry cellular localization intracellular transport establishment of localization in cell intracellular protein transport organelle assembly cellular pigmentation pigment granule organization vesicle organization cellular component organization cellular component biogenesis melanosome organization organelle organization pigmentation cellular component assembly cellular component organization or biogenesis melanosome assembly vesicle-mediated transport platelet dense granule organization secretory granule organization endomembrane system organization kidney development renal system development	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex vesicle coat intracellular vesicle membrane protein complex transport vesicle membrane clathrin coat of trans-Golgi network vesicle endomembrane system intracellular organelle membrane coat cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle protein-containing complex vesicle coat intracellular vesicle membrane protein complex transport vesicle membrane clathrin coat of trans-Golgi network vesicle endomembrane system intracellular organelle membrane coat bounding membrane of organelle trans-Golgi network transport vesicle membrane trans-Golgi network transport vesicle AP-type membrane coat adaptor complex AP-1 adaptor complex vesicle membrane cytoplasmic vesicle clathrin-coated vesicle clathrin vesicle coat coated vesicle Golgi-associated vesicle vesicle clathrin-coated vesicle membrane transport vesicle Golgi apparatus membrane intracellular membrane-bounded organelle coated membrane clathrin coat coated vesicle membrane cytoplasmic vesicle membrane organelle Golgi-associated vesicle membrane organelle membrane clathrin adaptor complex early endosome endosome vacuolar membrane lytic vacuole vacuole lytic vacuole membrane lysosomal membrane lysosome Golgi membrane Golgi apparatus subcompartment organelle subcompartment trans-Golgi network membrane trans-Golgi network synapse presynapse synaptic vesicle cell junction secretory vesicle exocytic vesicle
A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], X [auth Z]	Bone marrow stromal antigen 2, Protein Nef chimera	SH3 domain binding protein binding binding protein domain specific binding signaling receptor binding CD4 receptor binding kinase binding enzyme binding protein kinase binding thioesterase binding MHC class I protein binding MHC protein binding guanyl nucleotide binding GTP binding SH3 domain binding protein binding binding protein domain specific binding signaling receptor binding CD4 receptor binding kinase binding enzyme binding protein kinase binding thioesterase binding MHC class I protein binding MHC protein binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding ATPase binding RNA binding nucleic acid binding enzyme regulator activity molecular function inhibitor activity peptidase regulator activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity metalloendopeptidase inhibitor activity endopeptidase inhibitor activity identical protein binding protein homodimerization activity protein dimerization activity	symbiont-mediated perturbation of host defense response biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host immune response biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host immune response symbiont-mediated perturbation of host process symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I symbiont-mediated suppression of host antigen processing and presentation modulation of process of another organism symbiont-mediated suppression of host adaptive immune response viral process viral life cycle cellular response to stimulus symbiont-mediated perturbation of host defense response biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host immune response biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated suppression of host immune response symbiont-mediated perturbation of host process symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class I symbiont-mediated suppression of host antigen processing and presentation modulation of process of another organism symbiont-mediated suppression of host adaptive immune response viral process viral life cycle cellular response to stimulus regulation of biological process regulation of signaling regulation of cellular process response to stimulus signaling biological regulation regulation of signal transduction intracellular signal transduction cell communication regulation of intracellular signal transduction regulation of response to stimulus calcium-mediated signaling intracellular signaling cassette regulation of calcium-mediated signaling regulation of cell communication cellular process signal transduction negative regulation of biological process carbohydrate derivative metabolic process regulation of primary metabolic process negative regulation of cellular process protein metabolic process regulation of glycoprotein biosynthetic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process carbohydrate derivative biosynthetic process regulation of biosynthetic process negative regulation of glycoprotein biosynthetic process negative regulation of glycoprotein metabolic process regulation of protein metabolic process negative regulation of metabolic process glycoprotein biosynthetic process primary metabolic process regulation of macromolecule metabolic process glycoprotein metabolic process macromolecule biosynthetic process regulation of glycoprotein metabolic process biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of metabolic process symbiont-mediated suppression of host antigen processing and presentation of peptide antigen via MHC class II symbiont-mediated suppression of host innate immune response symbiont-mediated perturbation of host innate immune response symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host apoptosis symbiont-mediated perturbation of host programmed cell death symbiont-mediated suppression of host programmed cell death regulation of killing of cells of another organism disruption of cell in another organism regulation of cell killing symbiont-mediated perturbation of host apoptosis disruption of anatomical structure in another organism killing of cells of another organism cell killing symbiont-mediated suppression of host autophagy symbiont-mediated perturbation of host autophagy positive regulation of cell communication positive regulation of signal transduction positive regulation of canonical NF-kappaB signal transduction positive regulation of biological process positive regulation of response to stimulus positive regulation of cellular process positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction positive regulation of signaling negative regulation of viral life cycle negative regulation of intracellular transport of viral material regulation of viral life cycle regulation of viral process negative regulation of viral process intracellular transport of virus transport of virus regulation of intracellular transport of viral material regulation of biological process involved in symbiotic interaction regulation of immune effector process multicellular organismal process negative regulation of dendritic cell cytokine production dendritic cell cytokine production cytokine production leukocyte mediated immunity regulation of immune system process regulation of plasmacytoid dendritic cell cytokine production negative regulation of cytokine production involved in immune response regulation of cytokine production involved in immune response immune response negative regulation of immune effector process immune effector process regulation of gene expression regulation of leukocyte mediated immunity negative regulation of production of molecular mediator of immune response negative regulation of gene expression plasmacytoid dendritic cell cytokine production regulation of production of molecular mediator of immune response negative regulation of plasmacytoid dendritic cell cytokine production negative regulation of multicellular organismal process regulation of dendritic cell cytokine production regulation of cytokine production regulation of multicellular organismal process cytokine production involved in immune response production of molecular mediator of immune response negative regulation of cytokine production gene expression negative regulation of immune system process immune system process negative regulation of leukocyte mediated immunity regulation of cytoskeleton organization regulation of cellular component organization regulation of actin filament-based process actin cytoskeleton organization regulation of organelle organization cellular component organization organelle organization regulation of actin cytoskeleton organization actin filament-based process cellular component organization or biogenesis cytoskeleton organization B cell activation cell activation lymphocyte activation leukocyte activation response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus defense response to other organism response to stress innate immune response response to external biotic stimulus regulation of growth growth negative regulation of cell growth regulation of cell growth cell growth negative regulation of growth response to type II interferon response to cytokine response to peptide response to chemical negative regulation of locomotion regulation of cell motility regulation of locomotion regulation of cell migration negative regulation of cell motility cell migration cell motility negative regulation of cell migration locomotion negative regulation of viral genome replication viral genome replication regulation of viral genome replication response to virus response to interferon-alpha response to interferon-beta defense response to virus regulation of leukocyte proliferation cell population proliferation positive regulation of cell population proliferation leukocyte proliferation regulation of cell population proliferation positive regulation of leukocyte proliferation	cellular anatomical structure membrane extracellular region virion component host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell Golgi membrane host cell Golgi apparatus host cell cytoplasm part host cell cytoplasm cellular anatomical structure membrane extracellular region virion component host cell plasma membrane host cellular component host cell part host cell membrane other organism part host intracellular part host cell Golgi membrane host cell Golgi apparatus host cell cytoplasm part host cell cytoplasm host cell endomembrane system host intracellular region cell periphery apical part of cell plasma membrane plasma membrane region apical plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle intracellular anatomical structure intracellular vesicle lytic vacuole endomembrane system intracellular organelle bounding membrane of organelle vesicle membrane cytoplasmic vesicle lysosome vacuolar membrane azurophil granule vacuole intracellular membrane-bounded organelle lytic vacuole membrane cytoplasmic vesicle membrane lysosomal membrane secretory granule primary lysosome secretory vesicle azurophil granule membrane cytoplasm organelle membrane secretory granule membrane cell surface membrane microdomain membrane raft endosome late endosome multivesicular body side of membrane Golgi apparatus

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G [auth S], O [auth a], W [auth b]	IPR016635	Adaptor protein complex, sigma subunit	Family
G [auth S], O [auth a], W [auth b]	IPR011012	Longin-like domain superfamily	Homologous Superfamily
G [auth S], O [auth a], W [auth b]	IPR044733	AP-1 complex subunit sigma	Family
G [auth S], O [auth a], W [auth b]	IPR000804	Clathrin adaptor complex, small chain	Conserved Site
G [auth S], O [auth a], W [auth b]	IPR022775	AP complex, mu/sigma subunit	Domain
F [auth M], N [auth W], V [auth X]	IPR050431	Adaptor complexes medium subunit	Family
F [auth M], N [auth W], V [auth X]	IPR011012	Longin-like domain superfamily	Homologous Superfamily
F [auth M], N [auth W], V [auth X]	IPR022775	AP complex, mu/sigma subunit	Domain
F [auth M], N [auth W], V [auth X]	IPR036168	AP-2 complex subunit mu, C-terminal superfamily	Homologous Superfamily
F [auth M], N [auth W], V [auth X]	IPR028565	Mu homology domain	Domain
F [auth M], N [auth W], V [auth X]	IPR018240	Clathrin adaptor, mu subunit, conserved site	Conserved Site
F [auth M], N [auth W], V [auth X]	IPR001392	Clathrin adaptor, mu subunit	Family
D [auth G], L [auth Q], T [auth R]	IPR016024	Armadillo-type fold	Homologous Superfamily
D [auth G], L [auth Q], T [auth R]	IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Domain
D [auth G], L [auth Q], T [auth R]	IPR017107	Adaptor protein complex AP-1, gamma subunit	Family
D [auth G], L [auth Q], T [auth R]	IPR013041	Clathrin adaptor, appendage, Ig-like subdomain superfamily	Homologous Superfamily
D [auth G], L [auth Q], T [auth R]	IPR050840	Adaptor Complexes Large Subunit	Family
D [auth G], L [auth Q], T [auth R]	IPR011989	Armadillo-like helical	Homologous Superfamily
D [auth G], L [auth Q], T [auth R]	IPR008152	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain	Domain
D [auth G], L [auth Q], T [auth R]	IPR008153	Gamma-adaptin ear (GAE) domain	Domain
C, E [auth H], K, M [auth U], S [auth L], C, E [auth H], K, M [auth U], S [auth L], U [auth V]	IPR045872	ADP-ribosylation factor 1-5	Family
C, E [auth H], K, M [auth U], S [auth L], C, E [auth H], K, M [auth U], S [auth L], U [auth V]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
C, E [auth H], K, M [auth U], S [auth L], C, E [auth H], K, M [auth U], S [auth L], U [auth V]	IPR005225	Small GTP-binding domain	Domain
C, E [auth H], K, M [auth U], S [auth L], C, E [auth H], K, M [auth U], S [auth L], U [auth V]	IPR024156	Small GTPase superfamily, ARF type	Family
C, E [auth H], K, M [auth U], S [auth L], C, E [auth H], K, M [auth U], S [auth L], U [auth V]	IPR006689	Small GTPase superfamily, ARF/SAR type	Family
B, J [auth I], R [auth J]	IPR016024	Armadillo-type fold	Homologous Superfamily
B, J [auth I], R [auth J]	IPR013037	Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomain	Homologous Superfamily
B, J [auth I], R [auth J]	IPR000225	Armadillo	Repeat
B, J [auth I], R [auth J]	IPR026739	AP complex subunit beta	Family
B, J [auth I], R [auth J]	IPR011989	Armadillo-like helical	Homologous Superfamily
B, J [auth I], R [auth J]	IPR012295	TBP domain superfamily	Homologous Superfamily
B, J [auth I], R [auth J]	IPR002553	Clathrin/coatomer adaptor, adaptin-like, N-terminal	Domain
B, J [auth I], R [auth J]	IPR015151	Beta-adaptin appendage, C-terminal subdomain	Domain
B, J [auth I], R [auth J]	IPR013041	Clathrin adaptor, appendage, Ig-like subdomain superfamily	Homologous Superfamily
B, J [auth I], R [auth J]	IPR008152	Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain	Domain
B, J [auth I], R [auth J]	IPR009028	Coatomer/calthrin adaptor appendage, C-terminal subdomain	Homologous Superfamily
B, J [auth I], R [auth J]	IPR016342	AP-1/2/4 complex subunit beta	Family
A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], X [auth Z]	IPR001558	HIV negative factor Nef	Family
A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], X [auth Z]	IPR027480	HIV-1 Nef protein, anchor domain superfamily	Homologous Superfamily
A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], X [auth Z]	IPR027481	HIV-1 Nef protein, core domain superfamily	Homologous Superfamily
A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], X [auth Z]	IPR024886	Bone marrow stromal antigen 2	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
G [auth S], O [auth a], W [auth b]	Pharos: Q96PC3	psoriasis pustulosis palmaris et plantaris psoriasis 15, pustular, susceptibility to tuberculosis Acrodermatitis continua of Hallopeau malignant glioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm spina bifida ulcerative colitis atopic eczema interstitial cystitis malignant pancreatic neoplasm ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis pustulosis palmaris et plantaris psoriasis 15, pustular, susceptibility to tuberculosis Acrodermatitis continua of Hallopeau malignant glioma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm spina bifida ulcerative colitis atopic eczema interstitial cystitis malignant pancreatic neoplasm ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia transitional cell carcinoma atypical teratoid rhabdoid tumor large cell medulloblastoma medulloblastoma pancreatic intraductal papillary-mucinous carcinoma
C, E [auth H], K, M [auth U], S [auth L], C, E [auth H], K, M [auth U], S [auth L], U [auth V]	Pharos: P84077	breast carcinoma Neoplasm Invasiveness acute myeloid leukemia idiopathic scoliosis atypical teratoid rhabdoid tumor diabetes mellitus large cell medulloblastoma ovarian cancer breast cancer glioblastoma malignant glioma plasma cell myeloma
B, J [auth I], R [auth J]	Pharos: Q10567	astrocytic tumor osteosarcoma
A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], A [auth T], H [auth N], I [auth c], P [auth Y], Q [auth d], X [auth Z]	Pharos: Q10589	ovarian cancer pituitary cancer rheumatoid arthritis ulcerative colitis acute myeloid leukemia breast cancer cystic fibrosis esophageal adenocarcinoma large cell medulloblastoma malignant mesothelioma multiple sclerosis pancreatic ductal adenocarcinoma plasma cell myeloma subependymal giant cell astrocytoma AIDS ovarian cancer pituitary cancer rheumatoid arthritis ulcerative colitis acute myeloid leukemia breast cancer cystic fibrosis esophageal adenocarcinoma large cell medulloblastoma malignant mesothelioma multiple sclerosis pancreatic ductal adenocarcinoma plasma cell myeloma subependymal giant cell astrocytoma AIDS Crohn disease dermatomyositis glioblastoma lung cancer malignant pancreatic neoplasm nasopharyngeal carcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis tuberculosis astrocytic tumor cutaneous lupus erythematosus diabetes mellitus juvenile dermatomyositis lung carcinoma medulloblastoma