Crystal structure of the heme domain of CooA from Carboxydothermus hydrogenoformans
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e6cpbB1 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleotidyltransferase | T: VP4_haemagglut | F: | ECOD (20:10:01) | |
| A | e6cpbA1 | A: OB-fold | X: Nucleic acid-binding protein | H: Nucleotidyltransferase | T: V-set | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
| A | 2.60.120.10 | Mainly Beta | Sandwich | Jelly Rolls | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00027 | Cyclic nucleotide-binding domain (cNMP_binding) | Cyclic nucleotide-binding domain | This domain sensor domain can bind cAMP, cGMP, c-di-GMP, oxygen and 2-oxoglutarate (Matilla et. al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Carbon monoxide oxidation system transcription regulator CooA-1 | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050397 | Global Transcriptional Regulators in Environmental Response | Family | |
| IPR000595 | Cyclic nucleotide-binding domain | Domain | |
| IPR018490 | Cyclic nucleotide-binding domain superfamily | Homologous Superfamily | |
| IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily | |
| IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily | |
| IPR012318 | Crp-type HTH domain | Domain | |
| IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily |














