6CGH | pdb_00006cgh

Solution structure of the four-helix bundle region of human J-protein Zuotin, a component of ribosome-associated complex (RAC)

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	RAC_head_1	e6cghA1	A: alpha bundles	X: C-terminal Pdr1-activating domain of J-protein Zuo1 (From Topology)	H: C-terminal Pdr1-activating domain of J-protein Zuo1 (From Topology)	T: C-terminal Pdr1-activating domain of J-protein Zuo1	F: RAC_head_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF16717	Ribosome-associated complex head domain (RAC_head)	Ribosome-associated complex head domain	The RAC head domain is involved in ribosome binding [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	DnaJ homolog subfamily C member 2	protein binding binding histone binding ATPase activator activity molecular function activator activity molecular function regulator activity ATPase regulator activity ubiquitin-modified protein reader activity ubiquitin-modified histone reader activity histone reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity ubiquitin-like protein reader activity molecular adaptor activity protein binding binding histone binding ATPase activator activity molecular function activator activity molecular function regulator activity ATPase regulator activity ubiquitin-modified protein reader activity ubiquitin-modified histone reader activity histone reader activity chromatin-protein adaptor activity protein-macromolecule adaptor activity ubiquitin-like protein reader activity molecular adaptor activity chromatin binding Hsp70 protein binding protein-folding chaperone binding heat shock protein binding RNA binding nucleic acid binding ribonucleoprotein complex binding protein-containing complex binding ribosome binding	primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process 'de novo' cotranslational protein folding metabolic process cellular process protein metabolic process macromolecule metabolic process 'de novo' protein folding nucleobase-containing compound metabolic process DNA replication primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process 'de novo' cotranslational protein folding metabolic process cellular process protein metabolic process macromolecule metabolic process 'de novo' protein folding nucleobase-containing compound metabolic process DNA replication DNA metabolic process nucleic acid metabolic process biological regulation regulation of biological quality regulation of translational fidelity regulation of cellular process negative regulation of biological process regulation of DNA biosynthetic process regulation of primary metabolic process nucleic acid biosynthetic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process negative regulation of metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of DNA metabolic process regulation of macromolecule biosynthetic process regulation of metabolic process DNA biosynthetic process negative regulation of DNA biosynthetic process regulation of DNA metabolic process positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process RNA biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of RNA biosynthetic process positive regulation of RNA metabolic process regulation of gene expression positive regulation of RNA biosynthetic process regulation of DNA-templated transcription cellular response to stimulus cellular response to heat regulation of cellular response to heat response to stimulus regulation of cellular response to stress response to heat response to temperature stimulus cellular response to stress regulation of response to stimulus response to stress regulation of response to stress response to abiotic stimulus	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen nuclear membrane membrane endomembrane system organelle envelope nuclear envelope organelle membrane cytoplasm cytosol nucleoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR054076	Zuotin-like, zuotin homology domain	Domain
A	IPR017930	Myb domain	Domain
A	IPR001623	DnaJ domain	Domain
A	IPR009057	Homedomain-like superfamily	Homologous Superfamily
A	IPR018253	DnaJ domain, conserved site	Conserved Site
A	IPR032003	Ribosome-associated complex head domain	Domain
A	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily
A	IPR017884	SANT domain	Domain
A	IPR001005	SANT/Myb domain	Domain
A	IPR044634	J-protein Zuotin/DnaJC2	Family
A	IPR042569	Ribosome-associated complex head domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q99543	esophageal adenocarcinoma medulloblastoma progressive supranuclear palsy glioblastoma ovarian cancer malignant mesothelioma Pick disease

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.