6CD2 | pdb_00006cd2

Crystal structure of the PapC usher bound to the chaperone-adhesin PapD-PapG


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyBacterial adhesin-like 8034239 3000723 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPapD-like 8055309 3002067 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPapG_Ce6cd2B2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PapG_CECOD (1.6)
BPapG_Ne6cd2B1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PapG_NECOD (1.6)
CUNK_F_TYPEe6cd2C5 A: beta barrelsX: FimD N-terminal domain-likeH: FimD N-terminal domain-like (From Topology)T: FimD N-terminal domain-likeF: UNK_F_TYPEECOD (1.6)
CUsher_1ste6cd2C1 A: beta barrelsX: Outer membrane meander beta-barrelsH: Usher PapC translocation pore (From Topology)T: Usher PapC translocation poreF: Usher_1stECOD (1.6)
CUsher_2nde6cd2C3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Usher_2ndECOD (1.6)
CPapC_Ce6cd2C2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Prealbumin-likeF: PapC_CECOD (1.6)
APapD_Ce6cd2A1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PapD_CECOD (1.6)
APapD_Ne6cd2A2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PapD_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.1370 Mainly Beta Sandwich Immunoglobulin-like Bacterial adhesin receptor binding domainCATH (utative)
B2.60.40.1090 Mainly Beta Sandwich Immunoglobulin-like Fimbrial-type adhesion domainCATH (utative)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage