6C72 | pdb_00006c72

Crystal structure of a tailspike protein gp49 from Acinetobacter baumannii bacteriophage Fri1, a capsular polysaccharide depolymerase

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	UNK_F_TYPE	e6c72C2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: UNK_F_TYPE	ECOD (1.6)
C	UNK_F_TYPE	e6c72C3	A: beta sandwiches	X: tailspike protein Orf211 N-terminal domain (From Topology)	H: tailspike protein Orf211 N-terminal domain (From Topology)	T: tailspike protein Orf211 N-terminal domain	F: UNK_F_TYPE	ECOD (1.6)
C	Glyco_hydro_28	e6c72C1	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Pectin lyase-like (From Topology)	T: Pectin lyase-like	F: Glyco_hydro_28	ECOD (1.6)
B	UNK_F_TYPE	e6c72B2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: UNK_F_TYPE	ECOD (1.6)
B	UNK_F_TYPE	e6c72B3	A: beta sandwiches	X: tailspike protein Orf211 N-terminal domain (From Topology)	H: tailspike protein Orf211 N-terminal domain (From Topology)	T: tailspike protein Orf211 N-terminal domain	F: UNK_F_TYPE	ECOD (1.6)
B	Glyco_hydro_28	e6c72B1	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Pectin lyase-like (From Topology)	T: Pectin lyase-like	F: Glyco_hydro_28	ECOD (1.6)
A	UNK_F_TYPE	e6c72A3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: UNK_F_TYPE	ECOD (1.6)
A	UNK_F_TYPE	e6c72A2	A: beta sandwiches	X: tailspike protein Orf211 N-terminal domain (From Topology)	H: tailspike protein Orf211 N-terminal domain (From Topology)	T: tailspike protein Orf211 N-terminal domain	F: UNK_F_TYPE	ECOD (1.6)
A	Glyco_hydro_28	e6c72A1	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Pectin lyase-like (From Topology)	T: Pectin lyase-like	F: Glyco_hydro_28	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Particle-associated glycoside hydrolase	cation binding ion binding binding metal ion binding small molecule binding	symbiont-mediated disruption of host anatomical structure biological process involved in interspecies interaction between organisms viral life cycle symbiont-mediated disruption of host cell envelope symbiont-mediated disruption of host cellular anatomical structure biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell via disruption of host cell envelope symbiont entry into host cell viral process symbiont entry into host disruption of anatomical structure in another organism symbiont entry into host cell via disruption of host cell glycocalyx	virus tail virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR012334	Pectin lyase fold	Homologous Superfamily
A, B, C	IPR011050	Pectin lyase fold/virulence factor	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.