6C5L | pdb_00006c5l

Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
PB [auth CI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
I [auth AI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
NB [auth CG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
G [auth AG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
MD [auth DY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
FB [auth BY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
LD [auth DX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
EB [auth BX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
KD [auth DW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
DB [auth BW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
JD [auth DV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
CB [auth BV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
ID [auth DU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
BB [auth BU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
HD [auth DT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
AB [auth BT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
ZA [auth BS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
GD [auth DS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
YA [auth BR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
FD [auth DR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
LB [auth CE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
LB [auth CE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
E [auth AE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
XA [auth BQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
ED [auth DQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
WA [auth BP]SCOP2 FamilyRibosomal proteins L15p and L18e 8098927 4003555 SCOP2 (2022-06-29)
WA [auth BP]SCOP2 SuperfamilyRibosomal proteins L15p and L18e 8098928 3001045 SCOP2 (2022-06-29)
WA [auth BP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
DD [auth DP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
VA [auth BO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
CD [auth DO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
UA [auth BN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
BD [auth DN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
YC [auth DI]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
YC [auth DI]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
RA [auth BI]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
RA [auth BI]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
XC [auth DH]SCOP2B SuperfamilyRibosomal protein L6 8033202 3000724 SCOP2B (2022-06-29)
XC [auth DH]SCOP2B SuperfamilyRibosomal protein L6 8033203 3000724 SCOP2B (2022-06-29)
QA [auth BH]SCOP2B SuperfamilyRibosomal protein L6 8033202 3000724 SCOP2B (2022-06-29)
QA [auth BH]SCOP2B SuperfamilyRibosomal protein L6 8033203 3000724 SCOP2B (2022-06-29)
VC [auth DF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
OA [auth BF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
KB [auth CD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
D [auth AD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
UC [auth DE]SCOP2 FamilyRibosomal protein L3 8098741 4002103 SCOP2 (2022-06-29)
UC [auth DE]SCOP2 SuperfamilyTranslational proteins 8098742 3000811 SCOP2 (2022-06-29)
UC [auth DE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
NA [auth BE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
TC [auth DD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
TC [auth DD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
MA [auth BD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
MA [auth BD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
OC [auth D8]SCOP2 FamilyRibosomal protein L35p 8098933 4003406 SCOP2 (2022-06-29)
OC [auth D8]SCOP2 SuperfamilyL35p-like 8098934 3000790 SCOP2 (2022-06-29)
OC [auth D8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
HA [auth B8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
MC [auth D6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
FA [auth B6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
LC [auth D5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
EA [auth B5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
JB [auth CC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
JB [auth CC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
IC [auth D2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
BA [auth B2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
HC [auth D1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
AA [auth B1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
Z [auth B0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
GC [auth D0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
T [auth AT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
AC [auth CT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
IB [auth CB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
B [auth AB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
ZB [auth CS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
S [auth AS]SCOP2 FamilyRibosomal protein S19 8098937 4001081 SCOP2 (2022-06-29)
S [auth AS]SCOP2 SuperfamilyRibosomal protein S19 8098938 3000686 SCOP2 (2022-06-29)
S [auth AS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
YB [auth CR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
R [auth AR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
XB [auth CQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
Q [auth AQ]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
WB [auth CP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
P [auth AP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
UB [auth CN]SCOP2 FamilyRibosomal protein S14p/S29e 8098593 4003647 SCOP2 (2022-06-29)
UB [auth CN]SCOP2 SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8098594 3000068 SCOP2 (2022-06-29)
UB [auth CN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
N [auth AN]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
TB [auth CM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
M [auth AM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
SB [auth CL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
L [auth AL]SCOP2 FamilyCold shock DNA-binding domain-like 8098535 4001909 SCOP2 (2022-06-29)
L [auth AL]SCOP2 SuperfamilyNucleic acid-binding proteins 8098536 3000135 SCOP2 (2022-06-29)
L [auth AL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
RB [auth CK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
K [auth AK]SCOP2 FamilyRibosomal protein L18p and S11 8098851 4000555 SCOP2 (2022-06-29)
K [auth AK]SCOP2 SuperfamilyTranslational machinery components 8098852 3000571 SCOP2 (2022-06-29)
K [auth AK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
QB [auth CJ]SCOP2 FamilyRibosomal protein S10 8098935 4001240 SCOP2 (2022-06-29)
QB [auth CJ]SCOP2 SuperfamilyRibosomal protein S10 8098936 3001336 SCOP2 (2022-06-29)
QB [auth CJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
J [auth AJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
PB [auth CI]ATP-synt_Epse6c5lCI1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
I [auth AI]ATP-synt_Epse6c5lAI1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
OB [auth CH]ATP-synt_Epse6c5lCH1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
H [auth AH]ATP-synt_Epse6c5lAH1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
NB [auth CG]ATP-synt_Epse6c5lCG1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
G [auth AG]ATP-synt_Epse6c5lAG1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
MB [auth CF]ATP-synt_Epse6c5lCF1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
F [auth AF]ATP-synt_Epse6c5lAF1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
ND [auth DZ]ATP-synt_Epse6c5lDZ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
GB [auth BZ]ATP-synt_Epse6c5lBZ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
MD [auth DY]ATP-synt_Epse6c5lDY1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
FB [auth BY]ATP-synt_Epse6c5lBY1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
LD [auth DX]ATP-synt_Epse6c5lDX1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
EB [auth BX]ATP-synt_Epse6c5lBX1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
KD [auth DW]ATP-synt_Epse6c5lDW1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
DB [auth BW]ATP-synt_Epse6c5lBW1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
JD [auth DV]ATP-synt_Epse6c5lDV1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
CB [auth BV]ATP-synt_Epse6c5lBV1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
ID [auth DU]ATP-synt_Epse6c5lDU1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
BB [auth BU]ATP-synt_Epse6c5lBU1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
HD [auth DT]ATP-synt_Epse6c5lDT1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
AB [auth BT]ATP-synt_Epse6c5lBT1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
ZA [auth BS]ATP-synt_Epse6c5lBS1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
GD [auth DS]ATP-synt_Epse6c5lDS1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
YA [auth BR]ATP-synt_Epse6c5lBR1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
FD [auth DR]ATP-synt_Epse6c5lDR1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
LB [auth CE]ATP-synt_Epse6c5lCE1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
E [auth AE]ATP-synt_Epse6c5lAE1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
XA [auth BQ]ATP-synt_Epse6c5lBQ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
ED [auth DQ]ATP-synt_Epse6c5lDQ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
WA [auth BP]ATP-synt_Epse6c5lBP1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
DD [auth DP]ATP-synt_Epse6c5lDP1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
VA [auth BO]ATP-synt_Epse6c5lBO1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
CD [auth DO]ATP-synt_Epse6c5lDO1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
UA [auth BN]ATP-synt_Epse6c5lBN1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
BD [auth DN]ATP-synt_Epse6c5lDN1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
TA [auth BK]ATP-synt_Epse6c5lBK1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
AD [auth DK]ATP-synt_Epse6c5lDK1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
YC [auth DI]ATP-synt_Epse6c5lDI1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
RA [auth BI]ATP-synt_Epse6c5lBI1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
XC [auth DH]ATP-synt_Epse6c5lDH1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
QA [auth BH]ATP-synt_Epse6c5lBH1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
WC [auth DG]ATP-synt_Epse6c5lDG1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
PA [auth BG]ATP-synt_Epse6c5lBG1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
VC [auth DF]Ald_deCOasee6c5lDF1 A: a/b three-layered sandwichesX: Rubredoxin-likeH: Ferritin/Heme oxygenaseT: Heme oxygenase/Ribonucleotide reductaseF: Ald_deCOaseECOD (v294.1)
OA [auth BF]Ald_deCOasee6c5lBF1 A: a/b three-layered sandwichesX: Rubredoxin-likeH: Ferritin/Heme oxygenaseT: Heme oxygenase/Ribonucleotide reductaseF: Ald_deCOaseECOD (v294.1)
KB [auth CD]ATP-synt_Epse6c5lCD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
D [auth AD]ATP-synt_Epse6c5lAD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
UC [auth DE]ATP-synt_Epse6c5lDE1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
NA [auth BE]ATP-synt_Epse6c5lBE1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
TC [auth DD]ATP-synt_Epse6c5lDD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
MA [auth BD]ATP-synt_Epse6c5lBD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
SC [auth DC]ATP-synt_Epse6c5lDC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
LA [auth BC]ATP-synt_Epse6c5lBC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
PC [auth D9]ATP-synt_Epse6c5lD91 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
IA [auth B9]ATP-synt_Epse6c5lB91 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
OC [auth D8]ATP-synt_Epse6c5lD81 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
HA [auth B8]ATP-synt_Epse6c5lB81 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
NC [auth D7]ATP-synt_Epse6c5lD71 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
GA [auth B7]ATP-synt_Epse6c5lB71 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
MC [auth D6]ATP-synt_Epse6c5lD61 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
FA [auth B6]ATP-synt_Epse6c5lB61 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
LC [auth D5]ATP-synt_Epse6c5lD51 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
EA [auth B5]ATP-synt_Epse6c5lB51 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
JB [auth CC]ATP-synt_Epse6c5lCC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
C [auth AC]ATP-synt_Epse6c5lAC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
KC [auth D4]ATP-synt_Epse6c5lD41 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
DA [auth B4]ATP-synt_Epse6c5lB41 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
JC [auth D3]ATP-synt_Epse6c5lD31 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
CA [auth B3]ATP-synt_Epse6c5lB31 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
IC [auth D2]ATP-synt_Epse6c5lD21 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
BA [auth B2]ATP-synt_Epse6c5lB21 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
HC [auth D1]ATP-synt_Epse6c5lD11 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
AA [auth B1]ATP-synt_Epse6c5lB11 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
Z [auth B0]ATP-synt_Epse6c5lB01 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
GC [auth D0]ATP-synt_Epse6c5lD01 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
Y [auth AY]ATP-synt_Epse6c5lAY1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
FC [auth CY]ATP-synt_Epse6c5lCY1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
T [auth AT]ATP-synt_Epse6c5lAT1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
AC [auth CT]ATP-synt_Epse6c5lCT1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
IB [auth CB]ATP-synt_Epse6c5lCB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
B [auth AB]ATP-synt_Epse6c5lAB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
ZB [auth CS]ATP-synt_Epse6c5lCS1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
S [auth AS]ATP-synt_Epse6c5lAS1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
YB [auth CR]ATP-synt_Epse6c5lCR1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
R [auth AR]ATP-synt_Epse6c5lAR1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
XB [auth CQ]ATP-synt_Epse6c5lCQ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
Q [auth AQ]ATP-synt_Epse6c5lAQ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
WB [auth CP]ATP-synt_Epse6c5lCP1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
P [auth AP]ATP-synt_Epse6c5lAP1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
VB [auth CO]ATP-synt_Epse6c5lCO1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
O [auth AO]ATP-synt_Epse6c5lAO1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
UB [auth CN]ATP-synt_Epse6c5lCN1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
N [auth AN]ATP-synt_Epse6c5lAN1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
TB [auth CM]ATP-synt_Epse6c5lCM1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
M [auth AM]ATP-synt_Epse6c5lAM1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
SB [auth CL]ATP-synt_Epse6c5lCL1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
L [auth AL]ATP-synt_Epse6c5lAL1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
RB [auth CK]ATP-synt_Epse6c5lCK1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
K [auth AK]ATP-synt_Epse6c5lAK1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
QB [auth CJ]ATP-synt_Epse6c5lCJ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
J [auth AJ]ATP-synt_Epse6c5lAJ1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth AI],
PB [auth CI]		PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
H [auth AH],
OB [auth CH]		PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
G [auth AG],
NB [auth CG]		PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
F [auth AF],
MB [auth CF]		PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
GB [auth BZ],
ND [auth DZ]		PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
GB [auth BZ],
ND [auth DZ]		PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
FB [auth BY],
MD [auth DY]		PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
FB [auth BY],
MD [auth DY]		PF00467KOW motif (KOW)KOW motif- Family
EB [auth BX],
LD [auth DX]		PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
DB [auth BW],
KD [auth DW]		PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
CB [auth BV],
JD [auth DV]		PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
BB [auth BU],
ID [auth DU]		PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
AB [auth BT],
HD [auth DT]		PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
FD [auth DR],
YA [auth BR]		PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
E [auth AE],
LB [auth CE]		PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
E [auth AE],
LB [auth CE]		PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
ED [auth DQ],
XA [auth BQ]		PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
DD [auth DP],
WA [auth BP]		PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
CD [auth DO],
VA [auth BO]		PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
BD [auth DN],
UA [auth BN]		PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
AD [auth DK],
TA [auth BK]		PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
AD [auth DK],
TA [auth BK]		PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
RA [auth BI],
YC [auth DI]		PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
RA [auth BI],
YC [auth DI]		PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
QA [auth BH],
XC [auth DH]		PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
PA [auth BG],
WC [auth DG]		PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
PA [auth BG],
WC [auth DG]		PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
OA [auth BF],
VC [auth DF]		PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
D [auth AD],
KB [auth CD]		PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth AD],
KB [auth CD]		PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
NA [auth BE],
UC [auth DE]		PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
MA [auth BD],
TC [auth DD]		PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
MA [auth BD],
TC [auth DD]		PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
LA [auth BC],
SC [auth DC]		PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
HA [auth B8],
OC [auth D8]		PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
GA [auth B7],
NC [auth D7]		PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
EA [auth B5],
LC [auth D5]		PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
C [auth AC],
JB [auth CC]		PF07650KH domain (KH_2)KH domainDomain
C [auth AC],
JB [auth CC]		PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
CA [auth B3],
JC [auth D3]		PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
BA [auth B2],
IC [auth D2]		PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
AA [auth B1],
HC [auth D1]		PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
FC [auth CY],
Y [auth AY]		PF03462PCRF domain (PCRF)PCRF domainThis domain is found in peptide chain release factors. Domain
FC [auth CY],
Y [auth AY]		PF00472RF-1 domain (RF-1)RF-1 domainThis domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domai ...This domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domain contains a highly conserved motif GGQ, where the glutamine is thought to coordinate the water that mediates the hydrolysis.
Domain
B [auth AB],
IB [auth CB]		PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
R [auth AR],
YB [auth CR]		PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
Q [auth AQ],
XB [auth CQ]		PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
P [auth AP],
WB [auth CP]		PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
O [auth AO],
VB [auth CO]		PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
N [auth AN],
UB [auth CN]		PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
M [auth AM],
TB [auth CM]		PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
L [auth AL],
SB [auth CL]		PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
K [auth AK],
RB [auth CK]		PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
J [auth AJ],
QB [auth CJ]		PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AI],
PB [auth CI]		30S ribosomal protein S9
H [auth AH],
OB [auth CH]		30S ribosomal protein S8
G [auth AG],
NB [auth CG]		30S ribosomal protein S7
F [auth AF],
MB [auth CF]		30S ribosomal protein S6
GB [auth BZ],
ND [auth DZ]		50S ribosomal protein L25
FB [auth BY],
MD [auth DY]		50S ribosomal protein L24
EB [auth BX],
LD [auth DX]		50S ribosomal protein L23
DB [auth BW],
KD [auth DW]		50S ribosomal protein L22
CB [auth BV],
JD [auth DV]		50S ribosomal protein L21
BB [auth BU],
ID [auth DU]		50S ribosomal protein L20
AB [auth BT],
HD [auth DT]		50S ribosomal protein L19
GD [auth DS],
ZA [auth BS]		50S ribosomal protein L18
FD [auth DR],
YA [auth BR]		50S ribosomal protein L17
E [auth AE],
LB [auth CE]		30S ribosomal protein S5
ED [auth DQ],
XA [auth BQ]		50S ribosomal protein L16
DD [auth DP],
WA [auth BP]		50S ribosomal protein L15
CD [auth DO],
VA [auth BO]		50S ribosomal protein L14
BD [auth DN],
UA [auth BN]		50S ribosomal protein L13
AD [auth DK],
TA [auth BK]		50S ribosomal protein L11
SA [auth BJ],
ZC [auth DJ]		50S ribosomal protein L10---
RA [auth BI],
YC [auth DI]		50S ribosomal protein L9
QA [auth BH],
XC [auth DH]		50S ribosomal protein L6
PA [auth BG],
WC [auth DG]		50S ribosomal protein L5
OA [auth BF],
VC [auth DF]		50S ribosomal protein L4
D [auth AD],
KB [auth CD]		30S ribosomal protein S4
NA [auth BE],
UC [auth DE]		50S ribosomal protein L3
MA [auth BD],
TC [auth DD]		50S ribosomal protein L2
LA [auth BC],
SC [auth DC]		50S ribosomal protein L1
KA [auth BB],
RC [auth DB]		5S rRNA---
JA [auth BA],
QC [auth DA]		23S rRNA---
IA [auth B9],
PC [auth D9]		50S ribosomal protein L36
HA [auth B8],
OC [auth D8]		50S ribosomal protein L35
GA [auth B7],
NC [auth D7]		50S ribosomal protein L34
FA [auth B6],
MC [auth D6]		50S ribosomal protein L33
EA [auth B5],
LC [auth D5]		50S ribosomal protein L32
C [auth AC],
JB [auth CC]		30S ribosomal protein S3
DA [auth B4],
KC [auth D4]		50S ribosomal protein L31
CA [auth B3],
JC [auth D3]		50S ribosomal protein L30
BA [auth B2],
IC [auth D2]		50S ribosomal protein L29
AA [auth B1],
HC [auth D1]		50S ribosomal protein L28
GC [auth D0],
Z [auth B0]		50S ribosomal protein L27
FC [auth CY],
Y [auth AY]		Peptide chain release factor 2 -
EC [auth CX],
X [auth AX]		mRNA---
CC [auth CV],
DC [auth CW],
V [auth AV],
W [auth AW]		E-site tRNA PHE OR P-site tRNA PHE (unmodified bases)---
BC [auth CU],
U [auth AU]		30S ribosomal protein Thx -
AC [auth CT],
T [auth AT]		30S ribosomal protein S20
B [auth AB],
IB [auth CB]		30S ribosomal protein S2
S [auth AS],
ZB [auth CS]		30S ribosomal protein S19
R [auth AR],
YB [auth CR]		30S ribosomal protein S18
Q [auth AQ],
XB [auth CQ]		30S ribosomal protein S17
P [auth AP],
WB [auth CP]		30S ribosomal protein S16
O [auth AO],
VB [auth CO]		30S ribosomal protein S15
N [auth AN],
UB [auth CN]		30S ribosomal protein S14 type Z
M [auth AM],
TB [auth CM]		30S ribosomal protein S13
L [auth AL],
SB [auth CL]		30S ribosomal protein S12
K [auth AK],
RB [auth CK]		30S ribosomal protein S11
J [auth AJ],
QB [auth CJ]		30S ribosomal protein S10
A [auth AA],
HB [auth CA]		16S rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth AI],
PB [auth CI]		IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth AI],
PB [auth CI]		IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
I [auth AI],
PB [auth CI]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth AI],
PB [auth CI]		IPR000754Small ribosomal subunit protein uS9Family
I [auth AI],
PB [auth CI]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
H [auth AH],
OB [auth CH]		IPR000630Small ribosomal subunit protein uS8Family
H [auth AH],
OB [auth CH]		IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth AH],
OB [auth CH]		IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
G [auth AG],
NB [auth CG]		IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth AG],
NB [auth CG]		IPR000235Small ribosomal subunit protein uS7Family
G [auth AG],
NB [auth CG]		IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
G [auth AG],
NB [auth CG]		IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth AG],
NB [auth CG]		IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth AF],
MB [auth CF]		IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth AF],
MB [auth CF]		IPR000529Small ribosomal subunit protein bS6Family
F [auth AF],
MB [auth CF]		IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth AF],
MB [auth CF]		IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth AF],
MB [auth CF]		IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
GB [auth BZ],
ND [auth DZ]		IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
GB [auth BZ],
ND [auth DZ]		IPR001021Ribosomal protein bL25, long-formFamily
GB [auth BZ],
ND [auth DZ]		IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
GB [auth BZ],
ND [auth DZ]		IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
GB [auth BZ],
ND [auth DZ]		IPR020057Large ribosomal subunit protein bL25, beta domainDomain
GB [auth BZ],
ND [auth DZ]		IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
GB [auth BZ],
ND [auth DZ]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
FB [auth BY],
MD [auth DY]		IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
FB [auth BY],
MD [auth DY]		IPR003256Large ribosomal subunit protein uL24Family
FB [auth BY],
MD [auth DY]		IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
FB [auth BY],
MD [auth DY]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FB [auth BY],
MD [auth DY]		IPR005824KOWDomain
FB [auth BY],
MD [auth DY]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FB [auth BY],
MD [auth DY]		IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EB [auth BX],
LD [auth DX]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EB [auth BX],
LD [auth DX]		IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
EB [auth BX],
LD [auth DX]		IPR013025Large ribosomal subunit protein uL23-likeFamily
DB [auth BW],
KD [auth DW]		IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
DB [auth BW],
KD [auth DW]		IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
DB [auth BW],
KD [auth DW]		IPR001063Large ribosomal subunit protein uL22Family
DB [auth BW],
KD [auth DW]		IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
DB [auth BW],
KD [auth DW]		IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
CB [auth BV],
JD [auth DV]		IPR028909Large ribosomal subunit protein bL21-likeFamily
CB [auth BV],
JD [auth DV]		IPR001787Large ribosomal subunit protein bL21Family
CB [auth BV],
JD [auth DV]		IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
BB [auth BU],
ID [auth DU]		IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
BB [auth BU],
ID [auth DU]		IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
BB [auth BU],
ID [auth DU]		IPR005813Large ribosomal subunit protein bL20Family
AB [auth BT],
HD [auth DT]		IPR001857Large ribosomal subunit protein bL19Family
AB [auth BT],
HD [auth DT]		IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
AB [auth BT],
HD [auth DT]		IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
AB [auth BT],
HD [auth DT]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
GD [auth DS],
ZA [auth BS]		IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
GD [auth DS],
ZA [auth BS]		IPR057268Large ribosomal subunit protein uL18Family
GD [auth DS],
ZA [auth BS]		IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
FD [auth DR],
YA [auth BR]		IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
FD [auth DR],
YA [auth BR]		IPR000456Large ribosomal subunit protein bL17Family
E [auth AE],
LB [auth CE]		IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
E [auth AE],
LB [auth CE]		IPR000851Small ribosomal subunit protein uS5Family
E [auth AE],
LB [auth CE]		IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth AE],
LB [auth CE]		IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth AE],
LB [auth CE]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth AE],
LB [auth CE]		IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth AE],
LB [auth CE]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
ED [auth DQ],
XA [auth BQ]		IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
ED [auth DQ],
XA [auth BQ]		IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
ED [auth DQ],
XA [auth BQ]		IPR016180Large ribosomal subunit protein uL16 domainDomain
ED [auth DQ],
XA [auth BQ]		IPR047873Large ribosomal subunit protein uL16Family
DD [auth DP],
WA [auth BP]		IPR021131Large ribosomal subunit protein uL15/eL18Domain
DD [auth DP],
WA [auth BP]		IPR030878Large ribosomal subunit protein uL15Family
DD [auth DP],
WA [auth BP]		IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
DD [auth DP],
WA [auth BP]		IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
DD [auth DP],
WA [auth BP]		IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
CD [auth DO],
VA [auth BO]		IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
CD [auth DO],
VA [auth BO]		IPR000218Large ribosomal subunit protein uL14Family
CD [auth DO],
VA [auth BO]		IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
CD [auth DO],
VA [auth BO]		IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
BD [auth DN],
UA [auth BN]		IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
BD [auth DN],
UA [auth BN]		IPR005822Large ribosomal subunit protein uL13Family
BD [auth DN],
UA [auth BN]		IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
BD [auth DN],
UA [auth BN]		IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
AD [auth DK],
TA [auth BK]		IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
AD [auth DK],
TA [auth BK]		IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
AD [auth DK],
TA [auth BK]		IPR000911Ribosomal protein uL11Family
AD [auth DK],
TA [auth BK]		IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
AD [auth DK],
TA [auth BK]		IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
AD [auth DK],
TA [auth BK]		IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
AD [auth DK],
TA [auth BK]		IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
RA [auth BI],
YC [auth DI]		IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
RA [auth BI],
YC [auth DI]		IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
RA [auth BI],
YC [auth DI]		IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
RA [auth BI],
YC [auth DI]		IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
RA [auth BI],
YC [auth DI]		IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
RA [auth BI],
YC [auth DI]		IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
RA [auth BI],
YC [auth DI]		IPR000244Large ribosomal subunit protein bL9Family
QA [auth BH],
XC [auth DH]		IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
QA [auth BH],
XC [auth DH]		IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
QA [auth BH],
XC [auth DH]		IPR000702Large ribosomal subunit protein uL6-likeFamily
QA [auth BH],
XC [auth DH]		IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
PA [auth BG],
WC [auth DG]		IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
PA [auth BG],
WC [auth DG]		IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
PA [auth BG],
WC [auth DG]		IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
PA [auth BG],
WC [auth DG]		IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
PA [auth BG],
WC [auth DG]		IPR002132Large ribosomal subunit protein uL5Family
PA [auth BG],
WC [auth DG]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
OA [auth BF],
VC [auth DF]		IPR013005Large ribosomal subunit protein uL4-likeFamily
OA [auth BF],
VC [auth DF]		IPR002136Large ribosomal subunit protein uL4Family
OA [auth BF],
VC [auth DF]		IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
D [auth AD],
KB [auth CD]		IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth AD],
KB [auth CD]		IPR002942RNA-binding S4 domainDomain
D [auth AD],
KB [auth CD]		IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth AD],
KB [auth CD]		IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth AD],
KB [auth CD]		IPR022801Small ribosomal subunit protein uS4Family
D [auth AD],
KB [auth CD]		IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
NA [auth BE],
UC [auth DE]		IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
NA [auth BE],
UC [auth DE]		IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
NA [auth BE],
UC [auth DE]		IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
NA [auth BE],
UC [auth DE]		IPR000597Large ribosomal subunit protein uL3Family
MA [auth BD],
TC [auth DD]		IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
MA [auth BD],
TC [auth DD]		IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
MA [auth BD],
TC [auth DD]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth BD],
TC [auth DD]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth BD],
TC [auth DD]		IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
MA [auth BD],
TC [auth DD]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth BD],
TC [auth DD]		IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
MA [auth BD],
TC [auth DD]		IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
MA [auth BD],
TC [auth DD]		IPR002171Large ribosomal subunit protein uL2Family
LA [auth BC],
SC [auth DC]		IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
LA [auth BC],
SC [auth DC]		IPR005878Large ribosomal subunit protein uL1, bacteriaFamily
LA [auth BC],
SC [auth DC]		IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
LA [auth BC],
SC [auth DC]		IPR023674Ribosomal protein uL1-likeHomologous Superfamily
LA [auth BC],
SC [auth DC]		IPR002143Large ribosomal subunit protein uL1Family
LA [auth BC],
SC [auth DC]		IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
IA [auth B9],
PC [auth D9]		IPR000473Large ribosomal subunit protein bL36Family
IA [auth B9],
PC [auth D9]		IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
HA [auth B8],
OC [auth D8]		IPR021137Large ribosomal subunit protein bL35-likeFamily
HA [auth B8],
OC [auth D8]		IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
HA [auth B8],
OC [auth D8]		IPR001706Large ribosomal subunit protein bL35Family
HA [auth B8],
OC [auth D8]		IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
GA [auth B7],
NC [auth D7]		IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
GA [auth B7],
NC [auth D7]		IPR000271Large ribosomal subunit protein bL34Family
FA [auth B6],
MC [auth D6]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
FA [auth B6],
MC [auth D6]		IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
FA [auth B6],
MC [auth D6]		IPR001705Large ribosomal subunit protein bL33Family
FA [auth B6],
MC [auth D6]		IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
EA [auth B5],
LC [auth D5]		IPR002677Large ribosomal subunit protein bL32Family
EA [auth B5],
LC [auth D5]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
EA [auth B5],
LC [auth D5]		IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
C [auth AC],
JB [auth CC]		IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
C [auth AC],
JB [auth CC]		IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth AC],
JB [auth CC]		IPR057258Small ribosomal subunit protein uS3Family
C [auth AC],
JB [auth CC]		IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth AC],
JB [auth CC]		IPR004087K Homology domainDomain
C [auth AC],
JB [auth CC]		IPR004044K Homology domain, type 2Domain
C [auth AC],
JB [auth CC]		IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth AC],
JB [auth CC]		IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth AC],
JB [auth CC]		IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DA [auth B4],
KC [auth D4]		IPR002150Large ribosomal subunit protein bL31 type A/BFamily
DA [auth B4],
KC [auth D4]		IPR027491Large ribosomal subunit protein bL31 type AFamily
DA [auth B4],
KC [auth D4]		IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
DA [auth B4],
KC [auth D4]		IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CA [auth B3],
JC [auth D3]		IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
CA [auth B3],
JC [auth D3]		IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
CA [auth B3],
JC [auth D3]		IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
CA [auth B3],
JC [auth D3]		IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
BA [auth B2],
IC [auth D2]		IPR050063Universal ribosomal protein uL29Family
BA [auth B2],
IC [auth D2]		IPR001854Large ribosomal subunit protein uL29Family
BA [auth B2],
IC [auth D2]		IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
BA [auth B2],
IC [auth D2]		IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AA [auth B1],
HC [auth D1]		IPR050096Bacterial ribosomal protein bL28Family
AA [auth B1],
HC [auth D1]		IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
AA [auth B1],
HC [auth D1]		IPR026569Large ribosomal subunit protein bL28Family
AA [auth B1],
HC [auth D1]		IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
GC [auth D0],
Z [auth B0]		IPR001684Large ribosomal subunit protein bL27Family
GC [auth D0],
Z [auth B0]		IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
FC [auth CY],
Y [auth AY]		IPR004374Peptide chain release factor 2Family
FC [auth CY],
Y [auth AY]		IPR000352Peptide chain release factor class IDomain
FC [auth CY],
Y [auth AY]		IPR045853Peptide chain release factor class I superfamilyHomologous Superfamily
FC [auth CY],
Y [auth AY]		IPR005139Peptide chain release factorDomain
BC [auth CU],
U [auth AU]		IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
BC [auth CU],
U [auth AU]		IPR031414Small ribosomal subunit protein bTHXFamily
AC [auth CT],
T [auth AT]		IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
AC [auth CT],
T [auth AT]		IPR002583Small ribosomal subunit protein bS20Family
B [auth AB],
IB [auth CB]		IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth AB],
IB [auth CB]		IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth AB],
IB [auth CB]		IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth AB],
IB [auth CB]		IPR001865Small ribosomal subunit protein uS2Family
S [auth AS],
ZB [auth CS]		IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
S [auth AS],
ZB [auth CS]		IPR002222Small ribosomal subunit protein uS19Family
S [auth AS],
ZB [auth CS]		IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth AS],
ZB [auth CS]		IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
R [auth AR],
YB [auth CR]		IPR001648Small ribosomal subunit protein bS18Family
R [auth AR],
YB [auth CR]		IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth AR],
YB [auth CR]		IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
Q [auth AQ],
XB [auth CQ]		IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth AQ],
XB [auth CQ]		IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth AQ],
XB [auth CQ]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth AQ],
XB [auth CQ]		IPR000266Small ribosomal subunit protein uS17Family
P [auth AP],
WB [auth CP]		IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth AP],
WB [auth CP]		IPR000307Small ribosomal subunit protein bS16Family
O [auth AO],
VB [auth CO]		IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
O [auth AO],
VB [auth CO]		IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth AO],
VB [auth CO]		IPR000589Small ribosomal subunit protein uS15Family
N [auth AN],
UB [auth CN]		IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
N [auth AN],
UB [auth CN]		IPR001209Small ribosomal subunit protein uS14Family
N [auth AN],
UB [auth CN]		IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth AN],
UB [auth CN]		IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
M [auth AM],
TB [auth CM]		IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth AM],
TB [auth CM]		IPR001892Small ribosomal subunit protein uS13Family
M [auth AM],
TB [auth CM]		IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth AM],
TB [auth CM]		IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth AM],
TB [auth CM]		IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
L [auth AL],
SB [auth CL]		IPR006032Small ribosomal subunit protein uS12Family
L [auth AL],
SB [auth CL]		IPR005679Ribosomal protein uS12, bacteriaFamily
L [auth AL],
SB [auth CL]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth AK],
RB [auth CK]		IPR001971Small ribosomal subunit protein uS11Family
K [auth AK],
RB [auth CK]		IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth AK],
RB [auth CK]		IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
K [auth AK],
RB [auth CK]		IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
J [auth AJ],
QB [auth CJ]		IPR001848Small ribosomal subunit protein uS10Family
J [auth AJ],
QB [auth CJ]		IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth AJ],
QB [auth CJ]		IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth AJ],
QB [auth CJ]		IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
SA [auth BJ],
ZC [auth DJ]		UNK
FC [auth CY],
Y [auth AY]		MEQ Parent Component: GLN

RESID:  AA0071

PSI-MOD :  N5-methyl-L-glutamine MOD:00080