Structure of NlpC1 from Trichomonas vaginalis
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | SH3_3 | e6bioA3 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: SH3_3 | ECOD (1.6) |
| A | UNK_F_TYPE | e6bioA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: UNK_F_TYPE | ECOD (1.6) |
| A | NLPC_P60 | e6bioA2 | A: a+b complex topology | X: Cysteine proteinases-like | H: Cysteine proteinases (From Topology) | T: Cysteine proteinases | F: NLPC_P60 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.30.30.40 | Mainly Beta | Roll | SH3 type barrels. | SH3 Domains | CATH (utative) |
| A | 3.90.1720.10 | Alpha Beta | Alpha-Beta Complex | endopeptidase fold (from Nostoc punctiforme) | endopeptidase domain like (from Nostoc punctiforme) | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00877 | NlpC/P60 family (NLPC_P60) | NlpC/P60 family | The function of this domain is unknown. It is found in several lipoproteins. | Domain | |
| PF08239 | Bacterial SH3 domain (SH3_3) | Bacterial SH3 domain | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000064 | Endopeptidase, NLPC/P60 domain | Domain | |
| IPR003646 | SH3-like domain, bacterial-type | Domain | |
| IPR038765 | Papain-like cysteine peptidase superfamily | Homologous Superfamily | |
| IPR051794 | Peptidoglycan Endopeptidase C40 | Family |














