6BIO | pdb_00006bio

Structure of NlpC1 from Trichomonas vaginalis


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASH3_3e6bioA3 A: beta barrelsX: SH3H: SH3T: SH3F: SH3_3ECOD (1.6)
AUNK_F_TYPEe6bioA1 A: beta barrelsX: SH3H: SH3T: SH3F: UNK_F_TYPEECOD (1.6)
ANLPC_P60e6bioA2 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: NLPC_P60ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.30.30.40 Mainly Beta Roll SH3 type barrels. SH3 DomainsCATH (utative)
A3.90.1720.10 Alpha Beta Alpha-Beta Complex endopeptidase fold (from Nostoc punctiforme) endopeptidase domain like (from Nostoc punctiforme)CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00877NlpC/P60 family (NLPC_P60)NlpC/P60 familyThe function of this domain is unknown. It is found in several lipoproteins. Domain
PF08239Bacterial SH3 domain (SH3_3)Bacterial SH3 domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Clan CA, family C40, NlpC/P60 superfamily cysteine peptidase - -