6BEA

Crystal structure of the autotransporter UpaB from E. coli strain CFT073

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe6beaA1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: F_UNCLASSIFIEDECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Autotransporter protein UpaB- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006315Outer membrane autotransporter barrel domainDomain
IPR036709Autotransporter beta-domain superfamilyHomologous Superfamily
IPR012332Autotransporter, pectate lyase C-like domain superfamilyHomologous Superfamily
IPR003991Pertactin virulence factor familyFamily
IPR005546Autotransporter beta-domainDomain
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMMonotopic/peripheralAll beta monotopic/peripheralPectate lyase-likeAutotransporter pertactin domain