Annotations: 6AMA

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
K [auth P]	V-set	e6amaP1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
J [auth O]	V-set	e6amaO1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
I [auth D]	V-set	e6amaD1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
H [auth C]	V-set	e6amaC1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
G [auth Y]	V-set	e6amaY1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
F [auth L]	V-set	e6amaL1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
E [auth K]	V-set	e6amaK1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
D [auth H]	V-set	e6amaH1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
C [auth G]	V-set	e6amaG1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
B	V-set	e6amaB1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)
A	V-set	e6amaA1	A: a/b three-layered sandwiches	X: Periplasmic binding protein-like II	H: Rubredoxin-related	T: Tetrapyrrole methylase C-terminal domain	F: V-set	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth G], D [auth H], E [auth K], A, B, C [auth G], D [auth H], E [auth K], F [auth L], G [auth Y], H [auth C], I [auth D], J [auth O], K [auth P]	PF12728	Helix-turn-helix domain (HTH_17)	Helix-turn-helix domain	This domain is a DNA-binding helix-turn-helix domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
M [auth R]	DNA (99-MER)	-	-	-
L [auth N]	DNA (99-MER)	-	-	-
A, B, C [auth G], D [auth H], E [auth K], A, B, C [auth G], D [auth H], E [auth K], F [auth L], G [auth Y], H [auth C], I [auth D], J [auth O], K [auth P]	Putative DNA-binding protein	DNA binding binding nucleic acid binding	regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of cellular process RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process regulation of biological process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process cellular process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth G], D [auth H], E [auth K], A, B, C [auth G], D [auth H], E [auth K], F [auth L], G [auth Y], H [auth C], I [auth D], J [auth O], K [auth P]	IPR009061	Putative DNA-binding domain superfamily	Homologous Superfamily
A, B, C [auth G], D [auth H], E [auth K], A, B, C [auth G], D [auth H], E [auth K], F [auth L], G [auth Y], H [auth C], I [auth D], J [auth O], K [auth P]	IPR010093	SinI-like, DNA-binding domain	Domain
A, B, C [auth G], D [auth H], E [auth K], A, B, C [auth G], D [auth H], E [auth K], F [auth L], G [auth Y], H [auth C], I [auth D], J [auth O], K [auth P]	IPR048048	Transcriptional regulator BldC-like	Family
A, B, C [auth G], D [auth H], E [auth K], A, B, C [auth G], D [auth H], E [auth K], F [auth L], G [auth Y], H [auth C], I [auth D], J [auth O], K [auth P]	IPR041657	Helix-turn-helix domain, group 17	Domain
A, B, C [auth G], D [auth H], E [auth K], A, B, C [auth G], D [auth H], E [auth K], F [auth L], G [auth Y], H [auth C], I [auth D], J [auth O], K [auth P]	IPR000551	MerR-type HTH domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.