Cryo-EM structure of human Ribonuclease P with mature tRNA
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J | PLAT | e6ahuJ1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PLAT | ECOD (v294.1) |
| I | PLAT | e6ahuI1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PLAT | ECOD (v294.1) |
| H | PLAT | e6ahuH1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PLAT | ECOD (v294.1) |
| G | PLAT | e6ahuG1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PLAT | ECOD (v294.1) |
| F | PLAT | e6ahuF1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PLAT | ECOD (v294.1) |
| D | PLAT | e6ahuD1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PLAT | ECOD (v294.1) |
| L | NADHdh | e6ahuL1 | A: a/b three-layered sandwiches | X: Family A G protein-coupled receptor-like | H: Sodium/proton antiporter subunits-like | T: NADH-quinone oxidoreductase subunit 8 (Nqo8)-related | F: NADHdh | ECOD (v294.1) |
| K | PLAT | e6ahuK1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: a+b domain in beta-lactamase/transpeptidase-like proteins | T: a+b domain in beta-lactamase/transpeptidase-like proteins | F: PLAT | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| I | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (utative) |
| H | 3.30.70.3250 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Ribonuclease P, Pop5 subunit | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01876 | RNase P subunit p30 (RNase_P_p30) | RNase P subunit p30 | This protein is part of the RNase P complex that is involved in tRNA maturation [1]. | Domain | |
| PF01900 | Rpp14/Pop5 family (RNase_P_Rpp14) | Rpp14/Pop5 family | - | Family | |
| PF12328 | Rpp20 subunit of nuclear RNase MRP and P (Rpp20) | Rpp20 subunit of nuclear RNase MRP and P | - | Family | |
| PF01918 | Alba (Alba) | Alba | Alba is a novel chromosomal protein that coats archaeal DNA without compacting it. | Domain | |
| PF01900 | Rpp14/Pop5 family (RNase_P_Rpp14) | Rpp14/Pop5 family | - | Family | |
| PF01868 | Ribonuclease P/MRP, subunit p29 (RNase_P-MRP_p29) | Ribonuclease P/MRP, subunit p29 | - | Family | |
| PF22770 | POP1 C-terminal domain (POP1_C) | POP1 C-terminal domain | This entry represents the C-terminal domain of human Ribonuclease P/MRP protein subunit POP1 and similar eukaryotic sequences. POP1 is a component of Ribonuclease P that cleaves the 5' leader from precursor tRNAs. The C-terminal domain of POP1 intera ... | Domain | |
| PF08170 | POPLD (NUC188) domain (POPLD) | POPLD (NUC188) domain | This domain is found in POP1-like nucleolar proteins [1]. | Domain | |
| PF06978 | Ribonucleases P/MRP protein subunit POP1, N-terminal (POP1_N) | Ribonucleases P/MRP protein subunit POP1, N-terminal | This entry represents a conserved region approximately 150 residues long located towards the N-terminus of the POP1 subunit that is common to both the RNase MRP and RNase P ribonucleoproteins (EC:3.1.26.5) [1]. These RNA-containing enzymes generate m ... | Domain | |
| PF08584 | Ribonuclease P 40kDa (Rpp40) subunit (Ribonuc_P_40) | Ribonuclease P 40kDa (Rpp40) subunit | - | Family | |
| PF04032 | RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2) | RNAse P Rpr2/Rpp21/SNM1 subunit domain | - | Family | |














