Crystal structure of Hcp protein


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
FCadherine6a2vF1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: CadherinECOD (v295.2)
ECadherine6a2vE1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: CadherinECOD (v295.2)
DCadherine6a2vD1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: CadherinECOD (v295.2)
CCadherine6a2vC1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: CadherinECOD (v295.2)
BCadherine6a2vB1 A: alpha arraysX: fingers domain in bacteriophage RB69-like DNA polymerase IH: fingers domain in bacteriophage RB69-like DNA polymerase IT: fingers domain in bacteriophage RB69-like DNA polymerase IF: CadherinECOD (v295.2)
AFPN1e6a2vA1 A: alpha arraysX: Major facilitator superfamily (MFS) general substrate transporterH: Major facilitator superfamily (MFS) general substrate transporterT: Major facilitator superfamily (MFS) general substrate transporterF: FPN1ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F2.30.110.20 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
E2.30.110.20 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
D2.30.110.20 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
C2.30.110.20 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
B2.30.110.20 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)
A2.30.110.20 Mainly Beta Roll Pnp Oxidase Chain ACATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR036624Hcp1-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR008514Type VI secretion system effector HcpDomain