5YT6
Crystal structure of TAX1BP1 UBZ2 in complex with mono-ubiquitin
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth E] | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth F] | zf-C2H2_4_like | e5yt6F1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_4_like | ECOD (1.6) |
D [auth B] | zf-C2H2_4_like | e5yt6B1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_4_like | ECOD (1.6) |
F [auth D] | zf-C2H2_4_like | e5yt6D1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_4_like | ECOD (1.6) |
H | zf-C2H2_4_like | e5yt6H1 | A: few secondary structure elements | X: beta-beta-alpha zinc fingers | H: beta-beta-alpha zinc fingers (From Topology) | T: beta-beta-alpha zinc fingers | F: zf-C2H2_4_like | ECOD (1.6) |
A [auth E] | ubiquitin_1 | e5yt6E1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
C [auth A] | ubiquitin_1 | e5yt6A1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
E [auth C] | ubiquitin_1 | e5yt6C1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
G | ubiquitin_1 | e5yt6G1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: ubiquitin_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth F], D [auth B], F [auth D], H | PF18112 | Autophagy receptor zinc finger-C2H2 domain (Zn-C2H2_12) | Autophagy receptor zinc finger-C2H2 domain | This domain is found in calcium-binding and coiled-coil domain 2/NDP25 (CALCOCO2/NDP25) found in Homo sapiens. CALCOCO2/NDP25 is an ubiquitin-binding autophagy receptor involved in the selective autophagic degradation of invading pathogens. This doma ... | Domain |
A [auth E], C [auth A], E [auth C], G | PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth F], D [auth B], F [auth D], H | IPR041611 | SKICH domain | Domain |
B [auth F], D [auth B], F [auth D], H | IPR012852 | Calcium binding and coiled-coil domain-like | Domain |
B [auth F], D [auth B], F [auth D], H | IPR041641 | CALCOCO1/2, zinc finger UBZ1-type | Domain |
A [auth E], C [auth A], E [auth C], G | IPR019954 | Ubiquitin conserved site | Conserved Site |
A [auth E], C [auth A], E [auth C], G | IPR000626 | Ubiquitin-like domain | Domain |
A [auth E], C [auth A], E [auth C], G | IPR019956 | Ubiquitin domain | Domain |
A [auth E], C [auth A], E [auth C], G | IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
B [auth F], D [auth B], F [auth D], H | Q86VP1 | : |
A [auth E], C [auth A], E [auth C], G | P0CG47 | :