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 5WKZ | pdb_00005wkz

VH1-69 germline antibody predicted from CR6261

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth L]d5wkzl2 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin C1 set domains (antibody constant domain-like) automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
B [auth L]d5wkzl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth H]PRP8_domainIVe5wkzH1 A: alpha arraysX: Major facilitator superfamily (MFS) general substrate transporterH: Major facilitator superfamily (MFS) general substrate transporterT: Major facilitator superfamily (MFS) general substrate transporterF: PRP8_domainIVECOD (v295.2)
B [auth L]PRP8_domainIVe5wkzL1 A: alpha arraysX: Major facilitator superfamily (MFS) general substrate transporterH: Major facilitator superfamily (MFS) general substrate transporterT: Major facilitator superfamily (MFS) general substrate transporterF: PRP8_domainIVECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A [auth H]CR9114 IGHV1-69*01 (100%)/1GLV1-36*01 (100%) VH-CH1 Homo sapiens (human) IGHV1-69*01, IGHV1-69*12, IGHV1-69*13, IGHV1-69D*01, IGHJ1*01, IGHG1*03 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-1_LAMBDA IMGT (202638-0)
B [auth L]CR9114 IGHV1-69*01 (100%)/1GLV1-36*01 (100%) L-LAMBDA Homo sapiens (human) IGLV1-51*01, IGLJ2*01, IGLJ3*01, IGLC2*01, IGLC2*02, IGLC3*04 V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA IG FAB-GAMMA-1_LAMBDA IMGT (202638-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H]Heavy ChainIGHV1 --SAbDab (2026-10-02)
B [auth L]Light ChainIGLV1 Lambda-SAbDab (2026-10-02)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth H]PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth H]Immunoglobulin heavy variable 1-69D,IgG H chain
B [auth L]Lambda-chain (AA -20 to 215)- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth H]IPR050199Immunoglobulin Heavy VariableFamily
A [auth H]IPR013783Immunoglobulin-like foldHomologous Superfamily
A [auth H]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A [auth H]IPR013106Immunoglobulin V-set domainDomain
A [auth H]IPR007110Immunoglobulin-like domainDomain
A [auth H]IPR003597Immunoglobulin C1-setDomain
A [auth H]IPR050199Immunoglobulin Heavy VariableFamily
A [auth H]IPR013783Immunoglobulin-like foldHomologous Superfamily
A [auth H]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A [auth H]IPR013106Immunoglobulin V-set domainDomain
A [auth H]IPR003599Immunoglobulin domain subtypeDomain
A [auth H]IPR007110Immunoglobulin-like domainDomain
A [auth H]IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
B [auth L]IPR003597Immunoglobulin C1-setDomain
B [auth L]IPR050150Immunoglobulin Variable Light ChainFamily
B [auth L]IPR013783Immunoglobulin-like foldHomologous Superfamily
B [auth L]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B [auth L]IPR013106Immunoglobulin V-set domainDomain
B [auth L]IPR003599Immunoglobulin domain subtypeDomain
B [auth L]IPR007110Immunoglobulin-like domainDomain
B [auth L]IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site