5UI2 | pdb_00005ui2

CRYSTAL STRUCTURE OF ORANGE CAROTENOID PROTEIN

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d5ui2b1	All alpha proteins	Orange carotenoid protein, N-terminal domain	Orange carotenoid protein, N-terminal domain	Orange carotenoid protein, N-terminal domain	Orange carotenoid protein, N-terminal domain	(Limnospira maxima ) [TaxId: 129910 ],	SCOPe (2.08)
B	d5ui2b2	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Orange carotenoid protein, C-terminal domain	Orange carotenoid protein, C-terminal domain	(Limnospira maxima ) [TaxId: 129910 ],	SCOPe (2.08)
A	d5ui2a1	All alpha proteins	Orange carotenoid protein, N-terminal domain	Orange carotenoid protein, N-terminal domain	Orange carotenoid protein, N-terminal domain	Orange carotenoid protein, N-terminal domain	(Limnospira maxima ) [TaxId: 129910 ],	SCOPe (2.08)
A	d5ui2a2	Alpha and beta proteins (a+b)	Cystatin-like	NTF2-like	Orange carotenoid protein, C-terminal domain	Orange carotenoid protein, C-terminal domain	(Limnospira maxima ) [TaxId: 129910 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	NTF2-like	8043399	3000472	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Orange carotenoid protein, N-terminal domain	8043398	3001394	SCOP2B (2022-06-29)
A	SCOP2 Family	Orange carotenoid protein, N-terminal domain	8031020	4002541	SCOP2 (2022-06-29)
A	SCOP2 Family	Orange carotenoid protein, C-terminal domain	8031021	4003185	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Orange carotenoid protein, N-terminal domain	8043398	3001394	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	NTF2-like	8043399	3000472	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	WD40, Beta-prop_IFT122_1st	e5ui2B1	A: a/b three-layered sandwiches	X: HAD domain-like	H: beta-propeller	T: 8-bladed	F: WD40, Beta-prop_IFT122_1st	ECOD (v294.1)
A	NTF2	e5ui2A1	A: a/b three-layered sandwiches	X: HAD domain-like	H: NTF2-like	T: NTF2-like	F: NTF2	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.2090.10	Mainly Alpha	Orthogonal Bundle	orange carotenoid protein, domain 2	Orange carotenoid-binding protein, N-terminal domain	CATH (4.3.0)
B	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)
A	1.10.2090.10	Mainly Alpha	Orthogonal Bundle	orange carotenoid protein, domain 2	Orange carotenoid-binding protein, N-terminal domain	CATH (4.3.0)
A	3.10.450.50	Alpha Beta	Roll	Nuclear Transport Factor 2	Chain: A,	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Orange carotenoid-binding protein	molecular transducer activity photoreceptor activity signaling receptor activity ion binding binding anion binding chloride ion binding small molecule binding	detection of light stimulus response to light stimulus detection of external stimulus response to stimulus response to external stimulus detection of abiotic stimulus detection of stimulus light absorption response to abiotic stimulus response to radiation cellular process	intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region intracellular anatomical structure plasma membrane-derived chromatophore membrane membrane plasma membrane intracellular membraneless organelle plasma membrane-derived chromatophore thylakoid membrane intracellular organelle cell periphery cellular anatomical structure plasma membrane-derived thylakoid membrane organelle membraneless organelle plasma membrane region bacterial thylakoid cytoplasm photosynthetic membrane thylakoid protein-containing complex membrane protein complex light-harvesting complex phycobilisome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR015233	Orange carotenoid-binding protein, N-terminal	Domain
A, B	IPR032710	NTF2-like domain superfamily	Homologous Superfamily
A, B	IPR002075	Nuclear transport factor 2 domain	Domain
A, B	IPR036917	Orange carotenoid-binding protein, N-terminal domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.