5TRE

Zinc and the Iron Donor Frataxin Regulate Oligomerization of the Scaffold Protein to Form New Fe-S Cluster Assembly Centers


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth a]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
AA [auth n]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
E [auth c]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
GA [auth q]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
I [auth e]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
IA [auth r]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
KA [auth s]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
MA [auth t]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
O [auth h]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
OA [auth u]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
Q [auth i]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
QA [auth v]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
S [auth j]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
SA [auth w]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
U [auth k]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
UA [auth x]SCOP2 FamilyNifU/IscU domain8099085 4001402 SCOP2 (2022-06-29)
UA [auth x]SCOP2 SuperfamilySufE/NifU8099086 3000436 SCOP2 (2022-06-29)
W [auth l]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
C [auth b]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
CA [auth o]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
EA [auth p]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
G [auth d]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
K [auth f]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
M [auth g]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
Y [auth m]SCOP2B SuperfamilySufE/NifU8099086 3000436 SCOP2B (2022-06-29)
BA [auth N]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
DA [auth O]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
FA [auth P]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
H [auth D]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
J [auth E]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
JA [auth R]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
L [auth F]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
N [auth G]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
NA [auth T]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
P [auth H]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
R [auth I]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
T [auth J]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
TA [auth W]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
V [auth K]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
VA [auth X]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
X [auth L]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
Z [auth M]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
B [auth A]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
HA [auth Q]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
LA [auth S]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
PA [auth U]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)
RA [auth V]SCOP2B SuperfamilyFrataxin/Nqo15-like8041298 3001840 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth a]PF01592e5trea1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
AA [auth n]PF01592e5tren1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
E [auth c]PF01592e5trec1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
GA [auth q]PF01592e5treq1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
I [auth e]PF01592e5tree1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
IA [auth r]PF01592e5trer1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
KA [auth s]PF01592e5tres1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
MA [auth t]PF01592e5tret1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
O [auth h]PF01592e5treh1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
OA [auth u]PF01592e5treu1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
Q [auth i]PF01592e5trei1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
QA [auth v]PF01592e5trev1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
S [auth j]PF01592e5trej1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
SA [auth w]PF01592e5trew1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
U [auth k]PF01592e5trek1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
UA [auth x]PF01592e5trex1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
W [auth l]PF01592e5trel1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
C [auth b]PF01592e5treb1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
CA [auth o]PF01592e5treo1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
EA [auth p]PF01592e5trep1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
G [auth d]PF01592e5tred1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
K [auth f]PF01592e5tref1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
M [auth g]PF01592e5treg1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
Y [auth m]PF01592e5trem1 A: a+b two layersX: FAD-linked reductases, C-terminal domain-likeH: SufE/NifU (From Topology)T: SufE/NifUF: PF01592ECOD (1.6)
BA [auth N]PF01491e5treN1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
D [auth B]PF01491e5treB1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
DA [auth O]PF01491e5treO1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
F [auth C]PF01491e5treC1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
FA [auth P]PF01491e5treP1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
H [auth D]PF01491e5treD1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
J [auth E]PF01491e5treE1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
JA [auth R]PF01491e5treR1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
L [auth F]PF01491e5treF1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
N [auth G]PF01491e5treG1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
NA [auth T]PF01491e5treT1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
P [auth H]PF01491e5treH1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
R [auth I]PF01491e5treI1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
T [auth J]PF01491e5treJ1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
TA [auth W]PF01491e5treW1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
V [auth K]PF01491e5treK1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
VA [auth X]PF01491e5treX1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
X [auth L]PF01491e5treL1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
Z [auth M]PF01491e5treM1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
B [auth A]PF01491e5treA1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
HA [auth Q]PF01491e5treQ1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
LA [auth S]PF01491e5treS1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
PA [auth U]PF01491e5treU1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)
RA [auth V]PF01491e5treV1 A: a+b two layersX: Type III secretory system chaperone-likeH: Frataxin-like (From Topology)T: Frataxin-likeF: PF01491ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01592NifU-like N terminal domain (NifU_N)NifU-like N terminal domain- Family
PF01491Frataxin-like domain (Frataxin_Cyay)Frataxin-like domainThis family contains proteins that have a domain related to the globular C-terminus of Frataxin the protein that is mutated in Friedreich's ataxia. This domain is found in a family of bacterial proteins. The function of this domain is current ...This family contains proteins that have a domain related to the globular C-terminus of Frataxin the protein that is mutated in Friedreich's ataxia. This domain is found in a family of bacterial proteins. The function of this domain is currently unknown. It has been suggested that this family is involved in iron transport.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Iron sulfur cluster assembly protein 1, mitochondrial
Frataxin homolog, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR011339Iron-sulfur cluster assembly scaffold protein IscUFamily
IPR002871NIF system FeS cluster assembly, NifU, N-terminalDomain
IPR020895Frataxin conserved siteConserved Site
IPR017789FrataxinFamily
IPR036524Frataxin/CyaY superfamilyHomologous Superfamily
IPR002908Frataxin/CyaYFamily