Crystal structure of the receptor-binding domain of the FA hybrid Clostridium botulinum neurotoxin
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d5mk8b1 | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Clostridium botulinum ) [TaxId: 1491 ], | SCOPe (2.08) |
| B | d5mk8b2 | All beta proteins | beta-Trefoil | STI-like | Clostridium neurotoxins, C-terminal domain | automated matches | (Clostridium botulinum ) [TaxId: 1491 ], | SCOPe (2.08) |
| A | d5mk8a1 | All beta proteins | Concanavalin A-like lectins/glucanases | Concanavalin A-like lectins/glucanases | automated matches | automated matches | (Clostridium botulinum ) [TaxId: 1491 ], | SCOPe (2.08) |
| A | d5mk8a2 | All beta proteins | beta-Trefoil | STI-like | Clostridium neurotoxins, C-terminal domain | automated matches | (Clostridium botulinum ) [TaxId: 1491 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Toxin_R_bind_N | e5mk8B1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: Toxin_R_bind_N | ECOD (1.6) |
| B | Toxin_R_bind_C | e5mk8B2 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: Toxin_R_bind_C | ECOD (1.6) |
| A | Toxin_R_bind_N | e5mk8A2 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Concanavalin A-like lectins/glucanases | F: Toxin_R_bind_N | ECOD (1.6) |
| A | Toxin_R_bind_C | e5mk8A1 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: Toxin_R_bind_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| B | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) | |
| A | 2.60.120.200 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| A | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011065 | Kunitz inhibitor STI-like superfamily | Homologous Superfamily | |
| IPR013104 | Clostridium neurotoxin, receptor-binding C-terminal | Domain |
