Annotations: 5JYG

Cryo-EM structure of the MamK filament at 6.5 A

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
N	Glyco_hydro_18	e5jygN1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
M	Pantoate_ligase	e5jygM1	A: alpha arrays	X: Rossmann-like	H: RIFT-related	T: acid protease	F: Pantoate_ligase	ECOD (v295)
L	Glyco_hydro_18	e5jygL1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
K	Pantoate_ligase	e5jygK1	A: alpha arrays	X: Rossmann-like	H: RIFT-related	T: acid protease	F: Pantoate_ligase	ECOD (v295)
J	Glyco_hydro_18	e5jygJ1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
I	Glyco_hydro_18	e5jygI1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
H	Glyco_hydro_18	e5jygH1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
G	Glyco_hydro_18	e5jygG1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
F	Pantoate_ligase	e5jygF1	A: alpha arrays	X: Rossmann-like	H: RIFT-related	T: acid protease	F: Pantoate_ligase	ECOD (v295)
E	Glyco_hydro_18	e5jygE1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
D	Glyco_hydro_18	e5jygD1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
C	Glyco_hydro_18	e5jygC1	A: alpha arrays	X: omega toxin-like	H: HTH	T: Three-helical HTH	F: Glyco_hydro_18	ECOD (v295)
B	Pantoate_ligase	e5jygB1	A: alpha arrays	X: Rossmann-like	H: RIFT-related	T: acid protease	F: Pantoate_ligase	ECOD (v295)
A	Bromodomain	e5jygA2	A: alpha arrays	X: Rossmann-like	H: RIFT-related	T: acid protease	F: Bromodomain	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	Actin-like ATPase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity guanyl nucleotide binding GTP binding guanyl ribonucleotide binding cation binding metal ion binding	cellular component biogenesis cellular component organization organelle organization cellular component assembly organelle assembly magnetosome assembly cellular process cellular component organization or biogenesis	cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle cytoskeleton organelle membraneless organelle intracellular membraneless organelle magnetosome membrane-bounded organelle magnetosome membrane membrane intracellular membrane-bounded organelle organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	IPR043129	ATPase, nucleotide binding domain	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	IPR056546	MreB/MamK-like	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	IPR004000	Actin family	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5JYG | pdb_00005jyg

Cryo-EM structure of the MamK filament at 6.5 A

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage