5J4D

E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
KSCOP2B SuperfamilyRibosomal protein L138099906 3001134 SCOP2B (2022-06-29)
OB [auth PB]SCOP2B SuperfamilyRibosomal protein L138099906 3001134 SCOP2B (2022-06-29)
LSCOP2B Superfamily50S Ribosomal protein L14-like8093738 3000433 SCOP2B (2022-06-29)
PB [auth QB]SCOP2B Superfamily50S Ribosomal protein L14-like8093738 3000433 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRibosomal proteins L15p and L18e8099902 3001045 SCOP2B (2022-06-29)
QB [auth RB]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8099902 3001045 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyTranslational machinery components8074014 3000571 SCOP2B (2022-06-29)
TB [auth UB]SCOP2B SuperfamilyTranslational machinery components8074014 3000571 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyRibosomal protein L208093660 3000563 SCOP2B (2022-06-29)
VB [auth WB]SCOP2B SuperfamilyRibosomal protein L208093660 3000563 SCOP2B (2022-06-29)
SSCOP2B Superfamilyl21p-like8093656 3002005 SCOP2B (2022-06-29)
WB [auth XB]SCOP2B Superfamilyl21p-like8093656 3002005 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyRibosomal protein L228099898 3001078 SCOP2B (2022-06-29)
XB [auth YB]SCOP2B SuperfamilyRibosomal protein L228099898 3001078 SCOP2B (2022-06-29)
USCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8099896 3000210 SCOP2B (2022-06-29)
YB [auth ZB]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8099896 3000210 SCOP2B (2022-06-29)
BC [auth CC]SCOP2B SuperfamilyRibosomal L27 protein-like8041210 3000539 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyRibosomal L27 protein-like8041210 3000539 SCOP2B (2022-06-29)
DC [auth EC]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8076744 3000713 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyRibosomal protein L29 (L29p)8076744 3000713 SCOP2B (2022-06-29)
AASCOP2B SuperfamilyRibosomal protein L30p/L7e8099900 3001378 SCOP2B (2022-06-29)
EC [auth FC]SCOP2B SuperfamilyRibosomal protein L30p/L7e8099900 3001378 SCOP2B (2022-06-29)
CASCOP2B SuperfamilyZn-binding ribosomal proteins8081579 3001320 SCOP2B (2022-06-29)
GC [auth HC]SCOP2B SuperfamilyZn-binding ribosomal proteins8081579 3001320 SCOP2B (2022-06-29)
DASCOP2B SuperfamilyZn-binding ribosomal proteins8099892 3001320 SCOP2B (2022-06-29)
HC [auth IC]SCOP2B SuperfamilyZn-binding ribosomal proteins8099892 3001320 SCOP2B (2022-06-29)
FASCOP2B SuperfamilyL35p-like8099912 3000790 SCOP2B (2022-06-29)
JC [auth KC]SCOP2B SuperfamilyL35p-like8099912 3000790 SCOP2B (2022-06-29)
GASCOP2B SuperfamilyRibosomal protein L368093658 3001346 SCOP2B (2022-06-29)
KC [auth LC]SCOP2B SuperfamilyRibosomal protein L368093658 3001346 SCOP2B (2022-06-29)
JASCOP2B SuperfamilyPeptidyl-tRNA hydrolase domain-like8054407 3001421 SCOP2B (2022-06-29)
JASCOP2B SuperfamilyRNA-binding domain RBD8054405 3000110 SCOP2B (2022-06-29)
NC [auth OC]SCOP2B SuperfamilyPeptidyl-tRNA hydrolase domain-like8054407 3001421 SCOP2B (2022-06-29)
NC [auth OC]SCOP2B SuperfamilyRNA-binding domain RBD8054405 3000110 SCOP2B (2022-06-29)
KASCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063836 3001397 SCOP2B (2022-06-29)
OC [auth PC]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063836 3001397 SCOP2B (2022-06-29)
MASCOP2B SuperfamilyAlpha-L RNA-binding motif8093624 3001473 SCOP2B (2022-06-29)
QC [auth RC]SCOP2B SuperfamilyAlpha-L RNA-binding motif8093624 3001473 SCOP2B (2022-06-29)
OASCOP2B SuperfamilyRibosomal protein S68098858 3001323 SCOP2B (2022-06-29)
SC [auth TC]SCOP2B SuperfamilyRibosomal protein S68098858 3001323 SCOP2B (2022-06-29)
PASCOP2B SuperfamilyRibosomal protein S78093626 3000799 SCOP2B (2022-06-29)
TC [auth UC]SCOP2B SuperfamilyRibosomal protein S78093626 3000799 SCOP2B (2022-06-29)
QASCOP2B SuperfamilyRibosomal protein S88098860 3000709 SCOP2B (2022-06-29)
UC [auth VC]SCOP2B SuperfamilyRibosomal protein S88098860 3000709 SCOP2B (2022-06-29)
RASCOP2B SuperfamilyRibosomal protein S5 domain 2-like8093728 3000100 SCOP2B (2022-06-29)
VC [auth WC]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8093728 3000100 SCOP2B (2022-06-29)
SASCOP2B SuperfamilyRibosomal protein S108098850 3001336 SCOP2B (2022-06-29)
WC [auth XC]SCOP2B SuperfamilyRibosomal protein S108098850 3001336 SCOP2B (2022-06-29)
TASCOP2B SuperfamilyTranslational machinery components8098852 3000571 SCOP2B (2022-06-29)
XC [auth YC]SCOP2B SuperfamilyTranslational machinery components8098852 3000571 SCOP2B (2022-06-29)
UASCOP2B SuperfamilyNucleic acid-binding proteins8098824 3000135 SCOP2B (2022-06-29)
YC [auth ZC]SCOP2B SuperfamilyNucleic acid-binding proteins8098824 3000135 SCOP2B (2022-06-29)
VASCOP2B SuperfamilyS13-like H2TH domain8098854 3000053 SCOP2B (2022-06-29)
ZC [auth AD]SCOP2B SuperfamilyS13-like H2TH domain8098854 3000053 SCOP2B (2022-06-29)
AD [auth BD]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052583 3000068 SCOP2B (2022-06-29)
WASCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052583 3000068 SCOP2B (2022-06-29)
BBSCOP2B SuperfamilyRibosomal protein S198098856 3000686 SCOP2B (2022-06-29)
FD [auth GD]SCOP2B SuperfamilyRibosomal protein S198098856 3000686 SCOP2B (2022-06-29)
CBSCOP2B SuperfamilyRibosomal protein S208101559 3001362 SCOP2B (2022-06-29)
GD [auth HD]SCOP2B SuperfamilyRibosomal protein S208101559 3001362 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyTranslational proteins8089140 3000811 SCOP2B (2022-06-29)
JB [auth KB]SCOP2B SuperfamilyTranslational proteins8089140 3000811 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
JPF01281e5j4dJ1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
JPF03948e5j4dJ2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
NB [auth OB]PF01281e5j4dOB2 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: PF01281ECOD (1.6)
NB [auth OB]PF03948e5j4dOB1 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: PF03948ECOD (1.6)
KPF00572e5j4dK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
OB [auth PB]PF00572e5j4dPB1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
LPF00238e5j4dL1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
PB [auth QB]PF00238e5j4dQB1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
MPF00828e5j4dM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
QB [auth RB]PF00828e5j4dRB1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
NPF00252e5j4dN1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
RB [auth SB]PF00252e5j4dSB1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
OPF01196e5j4dO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
SB [auth TB]PF01196e5j4dTB1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
PPF00861e5j4dP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
TB [auth UB]PF00861e5j4dUB1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
QPF01245e5j4dQ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
UB [auth VB]PF01245e5j4dVB1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
RPF00453e5j4dR1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
VB [auth WB]PF00453e5j4dWB1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
SPF00829e5j4dS1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
WB [auth XB]PF00829e5j4dXB1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
TPF00237e5j4dT1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
XB [auth YB]PF00237e5j4dYB1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
UPF00276e5j4dU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
YB [auth ZB]PF00276e5j4dZB1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
VPF00467,PF17136e5j4dV1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
ZB [auth AC]PF00467,PF17136e5j4dAC1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
AC [auth BC]PF01386e5j4dBC1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
AC [auth BC]PF14693e5j4dBC2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: PF14693ECOD (1.6)
WPF01386e5j4dW1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
WPF14693e5j4dW2 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: PF14693ECOD (1.6)
BC [auth CC]PF01016e5j4dCC1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
XPF01016e5j4dX1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
CC [auth DC]PF00830e5j4dDC1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
YPF00830e5j4dY1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
DC [auth EC]PF00831e5j4dEC1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
ZPF00831e5j4dZ1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
AAPF00327e5j4dAA1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
EC [auth FC]PF00327e5j4dFC1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
BAPF01197e5j4dBA1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)
FC [auth GC]PF01197e5j4dGC1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: PF01197ECOD (1.6)
CAPF01783e5j4dCA1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
GC [auth HC]PF01783e5j4dHC1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
DAPF00471e5j4dDA1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
HC [auth IC]PF00471e5j4dIC1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
EAPF00468e5j4dEA1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
IC [auth JC]PF00468e5j4dJC1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
FAPF01632e5j4dFA1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
JC [auth KC]PF01632e5j4dKC1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
GAPF00444e5j4dGA1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
KC [auth LC]PF00444e5j4dLC1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
JAPF03462e5j4dJA1 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin-like domain in release factor (From Topology)T: Ferredoxin-like domain in release factorF: PF03462ECOD (1.6)
JAF_UNCLASSIFIEDe5j4dJA3 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: F_UNCLASSIFIEDECOD (1.6)
JAPF00472e5j4dJA2 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
NC [auth OC]PF03462e5j4dOC1 A: a+b two layersX: Alpha-beta plaitsH: Ferredoxin-like domain in release factor (From Topology)T: Ferredoxin-like domain in release factorF: PF03462ECOD (1.6)
NC [auth OC]F_UNCLASSIFIEDe5j4dOC3 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: F_UNCLASSIFIEDECOD (1.6)
NC [auth OC]PF00472e5j4dOC2 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: PF00472ECOD (1.6)
KAPF00318e5j4dKA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
OC [auth PC]PF00318e5j4dPC1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
LAPF00189e5j4dLA1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
LAPF07650e5j4dLA2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
PC [auth QC]PF00189e5j4dQC2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
PC [auth QC]PF07650e5j4dQC1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
MAPF00163,PF01479e5j4dMA1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
QC [auth RC]PF00163,PF01479e5j4dRC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
NAPF03719e5j4dNA2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
NAPF00333e5j4dNA1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
RC [auth SC]PF03719e5j4dSC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
RC [auth SC]PF00333e5j4dSC1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
OAPF01250e5j4dOA1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
SC [auth TC]PF01250e5j4dTC1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
PAPF00177e5j4dPA1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
TC [auth UC]PF00177e5j4dUC1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
QAPF00410e5j4dQA2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
QAPF00410e5j4dQA1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
UC [auth VC]PF00410e5j4dVC1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
UC [auth VC]PF00410e5j4dVC2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
RAPF00380e5j4dRA1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
VC [auth WC]PF00380e5j4dWC1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
SAPF00338e5j4dSA1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
WC [auth XC]PF00338e5j4dXC1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
TAPF00411e5j4dTA1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
XC [auth YC]PF00411e5j4dYC1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
UAPF00164e5j4dUA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
YC [auth ZC]PF00164e5j4dZC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
VAPF00416e5j4dVA1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
ZC [auth AD]PF00416e5j4dAD1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
AD [auth BD]PF00253e5j4dBD1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
WAPF00253e5j4dWA1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
BD [auth CD]PF00312e5j4dCD1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
XAPF00312e5j4dXA1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
EPF00181e5j4dE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
EPF03947e5j4dE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
IB [auth JB]PF00181e5j4dJB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
IB [auth JB]PF03947e5j4dJB2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
CD [auth DD]PF00886e5j4dDD1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
YAPF00886e5j4dYA1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
DD [auth ED]PF00366e5j4dED1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
ZAPF00366e5j4dZA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
ABPF01084e5j4dAB1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
ED [auth FD]PF01084e5j4dFD1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
BBPF00203e5j4dBB1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
FD [auth GD]PF00203e5j4dGD1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
CBPF01649e5j4dCB1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
GD [auth HD]PF01649e5j4dHD1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
FPF00297e5j4dF1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
JB [auth KB]PF00297e5j4dKB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
GPF00573e5j4dG1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
KB [auth LB]PF00573e5j4dLB1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
HPF00281,PF00673e5j4dH1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
LB [auth MB]PF00281,PF00673e5j4dMB1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
IPF00347e5j4dI2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
MB [auth NB]PF00347e5j4dNB2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J,
NB [auth OB]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
J,
NB [auth OB]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
K,
OB [auth PB]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
L,
PB [auth QB]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
M,
QB [auth RB]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
N,
RB [auth SB]
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
O,
SB [auth TB]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
P,
TB [auth UB]
PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
Q,
UB [auth VB]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
R,
VB [auth WB]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
S,
WB [auth XB]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
T,
XB [auth YB]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
U,
YB [auth ZB]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
V,
ZB [auth AC]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
V,
ZB [auth AC]
PF00467KOW motif (KOW)KOW motif- Family
AC [auth BC],
W
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
AC [auth BC],
W
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
BC [auth CC],
X
PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
CC [auth DC],
Y
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
DC [auth EC],
Z
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
AA,
EC [auth FC]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
BA,
FC [auth GC]
PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
CA,
GC [auth HC]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
DA,
HC [auth IC]
PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
EA,
IC [auth JC]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
FA,
JC [auth KC]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
GA,
KC [auth LC]
PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
JA,
NC [auth OC]
PF03462PCRF domain (PCRF)PCRF domainThis domain is found in peptide chain release factors.Domain
JA,
NC [auth OC]
PF00472RF-1 domain (RF-1)RF-1 domain- Family
KA,
OC [auth PC]
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
LA,
PC [auth QC]
PF07650KH domain (KH_2)KH domain- Domain
LA,
PC [auth QC]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
MA,
QC [auth RC]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
MA,
QC [auth RC]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
NA,
RC [auth SC]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
NA,
RC [auth SC]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
OA,
SC [auth TC]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
PA,
TC [auth UC]
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
QA,
UC [auth VC]
PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
RA,
VC [auth WC]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
SA,
WC [auth XC]
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
TA,
XC [auth YC]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
UA,
YC [auth ZC]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
VA,
ZC [auth AD]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
AD [auth BD],
WA
PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
BD [auth CD],
XA
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
E,
IB [auth JB]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
E,
IB [auth JB]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
CD [auth DD],
YA
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
DD [auth ED],
ZA
PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
AB,
ED [auth FD]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
BB,
FD [auth GD]
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
CB,
GD [auth HD]
PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
DB,
HD [auth ID]
PF1707030S ribosomal protein Thx (Thx)30S ribosomal protein Thx- Family
F,
JB [auth KB]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
G,
KB [auth LB]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
H,
LB [auth MB]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
H,
LB [auth MB]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
I,
MB [auth NB]
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
EB [auth FB]
16S ribosomal RNA---
J,
NB [auth OB]
50S ribosomal protein L9
K,
OB [auth PB]
50S ribosomal protein L13
L,
PB [auth QB]
50S ribosomal protein L14
M,
QB [auth RB]
50S ribosomal protein L15
N,
RB [auth SB]
50S ribosomal protein L16
O,
SB [auth TB]
50S ribosomal protein L17
P,
TB [auth UB]
50S ribosomal protein L18
Q,
UB [auth VB]
50S ribosomal protein L19
R,
VB [auth WB]
50S ribosomal protein L20
S,
WB [auth XB]
50S ribosomal protein L21
B,
FB [auth GB]
25S ribosomal RNA---
T,
XB [auth YB]
50S ribosomal protein L22
U,
YB [auth ZB]
50S ribosomal protein L23
V,
ZB [auth AC]
50S ribosomal protein L24
AC [auth BC],
W
50S ribosomal protein L25
BC [auth CC],
X
50S ribosomal protein L27
CC [auth DC],
Y
50S ribosomal protein L28
DC [auth EC],
Z
50S ribosomal protein L29
AA,
EC [auth FC]
50S ribosomal protein L30
BA,
FC [auth GC]
50S ribosomal protein L31
CA,
GC [auth HC]
50S ribosomal protein L32
C,
GB [auth HB]
5S ribosomal RNA---
DA,
HC [auth IC]
50S ribosomal protein L33
EA,
IC [auth JC]
50S ribosomal protein L34
FA,
JC [auth KC]
50S ribosomal protein L35
GA,
KC [auth LC]
50S ribosomal protein L36
HA,
LC [auth MC]
mRNA---
JA,
NC [auth OC]
Peptide chain release factor 1
KA,
OC [auth PC]
30S ribosomal protein S2
LA,
PC [auth QC]
30S ribosomal protein S3
MA,
QC [auth RC]
30S ribosomal protein S4
NA,
RC [auth SC]
30S ribosomal protein S5
D,
HB [auth IB],
IA,
MC [auth NC]
tRNA---
OA,
SC [auth TC]
30S ribosomal protein S6
PA,
TC [auth UC]
30S ribosomal protein S7
QA,
UC [auth VC]
30S ribosomal protein S8
RA,
VC [auth WC]
30S ribosomal protein S9
SA,
WC [auth XC]
30S ribosomal protein S10
TA,
XC [auth YC]
30S ribosomal protein S11
UA,
YC [auth ZC]
30S ribosomal protein S12
VA,
ZC [auth AD]
30S ribosomal protein S13
AD [auth BD],
WA
30S ribosomal protein S14 type Z
BD [auth CD],
XA
30S ribosomal protein S15
E,
IB [auth JB]
50S ribosomal protein L2
CD [auth DD],
YA
30S ribosomal protein S16
DD [auth ED],
ZA
30S ribosomal protein S17
AB,
ED [auth FD]
30S ribosomal protein S18
BB,
FD [auth GD]
30S ribosomal protein S19
CB,
GD [auth HD]
30S ribosomal protein S20
DB,
HD [auth ID]
30S ribosomal protein Thx -
F,
JB [auth KB]
50S ribosomal protein L3
G,
KB [auth LB]
50S ribosomal protein L4
H,
LB [auth MB]
50S ribosomal protein L5
I,
MB [auth NB]
50S ribosomal protein L6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J,
NB [auth OB]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
J,
NB [auth OB]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
J,
NB [auth OB]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
J,
NB [auth OB]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
J,
NB [auth OB]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
J,
NB [auth OB]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
J,
NB [auth OB]
IPR000244Large ribosomal subunit protein bL9Family
K,
OB [auth PB]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
K,
OB [auth PB]
IPR005822Large ribosomal subunit protein uL13Family
K,
OB [auth PB]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
K,
OB [auth PB]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
L,
PB [auth QB]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
L,
PB [auth QB]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
L,
PB [auth QB]
IPR000218Large ribosomal subunit protein uL14Family
L,
PB [auth QB]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
M,
QB [auth RB]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
M,
QB [auth RB]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
M,
QB [auth RB]
IPR030878Large ribosomal subunit protein uL15Family
M,
QB [auth RB]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
M,
QB [auth RB]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
N,
RB [auth SB]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
N,
RB [auth SB]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
N,
RB [auth SB]
IPR016180Large ribosomal subunit protein uL16 domainDomain
N,
RB [auth SB]
IPR047873Large ribosomal subunit protein uL16Family
O,
SB [auth TB]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
O,
SB [auth TB]
IPR000456Large ribosomal subunit protein bL17Family
P,
TB [auth UB]
IPR005484Large ribosomal subunit protein uL18Family
P,
TB [auth UB]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
Q,
UB [auth VB]
IPR001857Large ribosomal subunit protein bL19Family
Q,
UB [auth VB]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
Q,
UB [auth VB]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
Q,
UB [auth VB]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
R,
VB [auth WB]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
R,
VB [auth WB]
IPR005813Large ribosomal subunit protein bL20Family
S,
WB [auth XB]
IPR028909Large ribosomal subunit protein bL21-likeFamily
S,
WB [auth XB]
IPR001787Large ribosomal subunit protein bL21Family
S,
WB [auth XB]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
T,
XB [auth YB]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
T,
XB [auth YB]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
T,
XB [auth YB]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
T,
XB [auth YB]
IPR001063Large ribosomal subunit protein uL22Family
T,
XB [auth YB]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
U,
YB [auth ZB]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
U,
YB [auth ZB]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
U,
YB [auth ZB]
IPR013025Large ribosomal subunit protein uL23-likeFamily
V,
ZB [auth AC]
IPR003256Large ribosomal subunit protein uL24Family
V,
ZB [auth AC]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
V,
ZB [auth AC]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
V,
ZB [auth AC]
IPR005824KOWDomain
V,
ZB [auth AC]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
V,
ZB [auth AC]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
AC [auth BC],
W
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
AC [auth BC],
W
IPR001021Ribosomal protein bL25, long-formFamily
AC [auth BC],
W
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
AC [auth BC],
W
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
AC [auth BC],
W
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
AC [auth BC],
W
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
BC [auth CC],
X
IPR001684Large ribosomal subunit protein bL27Family
BC [auth CC],
X
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
CC [auth DC],
Y
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
CC [auth DC],
Y
IPR026569Large ribosomal subunit protein bL28Family
CC [auth DC],
Y
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
DC [auth EC],
Z
IPR001854Large ribosomal subunit protein uL29Family
DC [auth EC],
Z
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
DC [auth EC],
Z
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
AA,
EC [auth FC]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
AA,
EC [auth FC]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
AA,
EC [auth FC]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
AA,
EC [auth FC]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
BA,
FC [auth GC]
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
BA,
FC [auth GC]
IPR027491Large ribosomal subunit protein bL31 type AFamily
BA,
FC [auth GC]
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
BA,
FC [auth GC]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
CA,
GC [auth HC]
IPR002677Large ribosomal subunit protein bL32Family
CA,
GC [auth HC]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
CA,
GC [auth HC]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
DA,
HC [auth IC]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA,
HC [auth IC]
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
DA,
HC [auth IC]
IPR001705Large ribosomal subunit protein bL33Family
DA,
HC [auth IC]
IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
EA,
IC [auth JC]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
EA,
IC [auth JC]
IPR000271Large ribosomal subunit protein bL34Family
FA,
JC [auth KC]
IPR021137Large ribosomal subunit protein bL35-likeFamily
FA,
JC [auth KC]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
FA,
JC [auth KC]
IPR001706Large ribosomal subunit protein bL35Family
FA,
JC [auth KC]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
GA,
KC [auth LC]
IPR000473Large ribosomal subunit protein bL36Family
GA,
KC [auth LC]
IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
JA,
NC [auth OC]
IPR004373Peptide chain release factor 1Family
JA,
NC [auth OC]
IPR000352Peptide chain release factor class IDomain
JA,
NC [auth OC]
IPR045853Peptide chain release factor class I superfamilyHomologous Superfamily
JA,
NC [auth OC]
IPR005139Peptide chain release factorDomain
KA,
OC [auth PC]
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
KA,
OC [auth PC]
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
KA,
OC [auth PC]
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
KA,
OC [auth PC]
IPR001865Small ribosomal subunit protein uS2Family
LA,
PC [auth QC]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
LA,
PC [auth QC]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
LA,
PC [auth QC]
IPR004087K Homology domainDomain
LA,
PC [auth QC]
IPR004044K Homology domain, type 2Domain
LA,
PC [auth QC]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
LA,
PC [auth QC]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
LA,
PC [auth QC]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
LA,
PC [auth QC]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
MA,
QC [auth RC]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
MA,
QC [auth RC]
IPR002942RNA-binding S4 domainDomain
MA,
QC [auth RC]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
MA,
QC [auth RC]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
MA,
QC [auth RC]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
MA,
QC [auth RC]
IPR022801Small ribosomal subunit protein uS4Family
NA,
RC [auth SC]
IPR000851Small ribosomal subunit protein uS5Family
NA,
RC [auth SC]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
NA,
RC [auth SC]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
NA,
RC [auth SC]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NA,
RC [auth SC]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
NA,
RC [auth SC]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
NA,
RC [auth SC]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
OA,
SC [auth TC]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
OA,
SC [auth TC]
IPR000529Small ribosomal subunit protein bS6Family
OA,
SC [auth TC]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
OA,
SC [auth TC]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
OA,
SC [auth TC]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
PA,
TC [auth UC]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
PA,
TC [auth UC]
IPR000235Small ribosomal subunit protein uS7Family
PA,
TC [auth UC]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
PA,
TC [auth UC]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
PA,
TC [auth UC]
IPR023798Small ribosomal subunit protein uS7 domainDomain
QA,
UC [auth VC]
IPR000630Small ribosomal subunit protein uS8Family
QA,
UC [auth VC]
IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
QA,
UC [auth VC]
IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
RA,
VC [auth WC]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
RA,
VC [auth WC]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
RA,
VC [auth WC]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
RA,
VC [auth WC]
IPR000754Small ribosomal subunit protein uS9Family
RA,
VC [auth WC]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
SA,
WC [auth XC]
IPR001848Small ribosomal subunit protein uS10Family
SA,
WC [auth XC]
IPR027486Small ribosomal subunit protein uS10 domainDomain
SA,
WC [auth XC]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
SA,
WC [auth XC]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TA,
XC [auth YC]
IPR001971Small ribosomal subunit protein uS11Family
TA,
XC [auth YC]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
TA,
XC [auth YC]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
TA,
XC [auth YC]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
UA,
YC [auth ZC]
IPR006032Small ribosomal subunit protein uS12Family
UA,
YC [auth ZC]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA,
YC [auth ZC]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
VA,
ZC [auth AD]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
VA,
ZC [auth AD]
IPR001892Small ribosomal subunit protein uS13Family
VA,
ZC [auth AD]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
VA,
ZC [auth AD]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
VA,
ZC [auth AD]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
AD [auth BD],
WA
IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
AD [auth BD],
WA
IPR001209Small ribosomal subunit protein uS14Family
AD [auth BD],
WA
IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
AD [auth BD],
WA
IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
BD [auth CD],
XA
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
BD [auth CD],
XA
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
BD [auth CD],
XA
IPR000589Small ribosomal subunit protein uS15Family
E,
IB [auth JB]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
E,
IB [auth JB]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E,
IB [auth JB]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E,
IB [auth JB]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
E,
IB [auth JB]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
E,
IB [auth JB]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
E,
IB [auth JB]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
E,
IB [auth JB]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
E,
IB [auth JB]
IPR002171Large ribosomal subunit protein uL2Family
CD [auth DD],
YA
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
CD [auth DD],
YA
IPR000307Small ribosomal subunit protein bS16Family
DD [auth ED],
ZA
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
DD [auth ED],
ZA
IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
DD [auth ED],
ZA
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DD [auth ED],
ZA
IPR000266Small ribosomal subunit protein uS17Family
AB,
ED [auth FD]
IPR001648Small ribosomal subunit protein bS18Family
AB,
ED [auth FD]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
AB,
ED [auth FD]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
BB,
FD [auth GD]
IPR002222Small ribosomal subunit protein uS19Family
BB,
FD [auth GD]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
BB,
FD [auth GD]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
BB,
FD [auth GD]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
CB,
GD [auth HD]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
CB,
GD [auth HD]
IPR002583Small ribosomal subunit protein bS20Family
DB,
HD [auth ID]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
DB,
HD [auth ID]
IPR031414Small ribosomal subunit protein bTHXFamily
F,
JB [auth KB]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
F,
JB [auth KB]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
F,
JB [auth KB]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
F,
JB [auth KB]
IPR000597Large ribosomal subunit protein uL3Family
G,
KB [auth LB]
IPR013005Large ribosomal subunit protein uL4-likeFamily
G,
KB [auth LB]
IPR002136Large ribosomal subunit protein uL4Family
G,
KB [auth LB]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
H,
LB [auth MB]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
H,
LB [auth MB]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
H,
LB [auth MB]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
H,
LB [auth MB]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
H,
LB [auth MB]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
H,
LB [auth MB]
IPR002132Large ribosomal subunit protein uL5Family
I,
MB [auth NB]
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
I,
MB [auth NB]
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
I,
MB [auth NB]
IPR000702Large ribosomal subunit protein uL6-likeFamily
I,
MB [auth NB]
IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily