5IC0 | pdb_00005ic0

Structural analysis of a talin triple domain module


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Atalin-RSe5ic0A2 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-catenin-relatedT: alpha-catenin/vinculinF: talin-RSECOD (1.6)
AVBS_1e5ic0A1 A: alpha bundlesX: Four-helical up-and-down bundleH: alpha-catenin-relatedT: I/LWEQ domain (Pfam 01608)F: VBS_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.1420.10 Mainly Alpha Up-down Bundle A middle domain of Talin 1 Talin, central domainCATH (4.3.0)
A1.20.120.230 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) Alpha-catenin/vinculin-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF21896Talin IBS2B domain (Talin_IBS2B)Talin IBS2B domainThis entry represents the Talin IBS2B domain. Talin is an adaptor protein that activates integrin family of cell adhesion molecules and couples them to the actin cytoskeleton. The integrin activation is known to involve binding of the talin FERM doma ...This entry represents the Talin IBS2B domain. Talin is an adaptor protein that activates integrin family of cell adhesion molecules and couples them to the actin cytoskeleton. The integrin activation is known to involve binding of the talin FERM domain to membrane proximal sequences in the cytoplasmic domain of the integrin beta-subunit. IBS2 is a second integrin-binding site that has been identified near the C-terminal end of the talin rod. The crystal structure of IBS2 reveals two five-helix bundles, IBS2-A and IBS2-B, connected by a continuous helix. The Talin IBS2B domain is essential for integrin binding, binding to acidic phospholipids, and targeting to focal adhesions. The domain comprises a tandem pair of five-helix bundles with the same topology, comprising five anti-parallel alpha-helices [1]. This entry represents the second of the two domains. This domain is also found in Talin rod domain-containing protein 1, an actin-binding protein that may have an oncogenic function and regulates cell proliferation, migration and invasion in cancer cells [2].
Domain
PF21865Talin 1-like, rod segment domain (TLN1-like_RS)Talin 1-like, rod segment domainThis domain is found repeated in human Talin-1 (TLN1) and similar proteins mainly found in animals. Talin is an essential component in focal adhesions (FAs), intracellular protein assemblies that serve as tension-sensing anchoring points to link cell ...This domain is found repeated in human Talin-1 (TLN1) and similar proteins mainly found in animals. Talin is an essential component in focal adhesions (FAs), intracellular protein assemblies that serve as tension-sensing anchoring points to link cells to the extracellular environment. This protein plays a key regulatory role in FA dynamics, similar to the activation and inactivation of integrins. It consists of a globular head, a long rod made of 62 helices forming 13 helical bundle (rod segment, RS) domains, and a dimerisation (DD) motif at the C terminus. This entry represents four of these domains, RS 5, 6, 9 and 11 [6,7].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Talin-1