5HVZ
Crystal structure of smAKAP AKB domain bound RIa dimerization/docking (D/D) complex at 2.0 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02197 | e5hvzA1 | A: alpha duplicates or obligate multimers | X: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology) | H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology) | T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit | F: PF02197 | ECOD (1.6) |
B | PF02197 | e5hvzB1 | A: alpha duplicates or obligate multimers | X: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology) | H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology) | T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit | F: PF02197 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.890.10 | Mainly Alpha | Up-down Bundle | cAMP-dependent Protein Kinase, Chain A | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | CATH (4.3.0) |
B | 1.20.890.10 | Mainly Alpha | Up-down Bundle | cAMP-dependent Protein Kinase, Chain A | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02197 | Regulatory subunit of type II PKA R-subunit (RIIa) | Regulatory subunit of type II PKA R-subunit | - | Domain | |
PF15127 | Small membrane A-kinase anchor protein (SmAKAP) | Small membrane A-kinase anchor protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014710 | RmlC-like jelly roll fold | Homologous Superfamily | |
IPR018488 | Cyclic nucleotide-binding, conserved site | Conserved Site | |
IPR003117 | cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domain | Domain | |
IPR000595 | Cyclic nucleotide-binding domain | Domain | |
IPR012198 | cAMP-dependent protein kinase regulatory subunit | Family | |
IPR018490 | Cyclic nucleotide-binding domain superfamily | Homologous Superfamily | |
IPR027969 | Small membrane A-kinase anchor protein | Family |