5HO9 | pdb_00005ho9

Structure of truncated AbnA (domains 1-3), a GH43 arabinanase from Geobacilllus stearothermophilus, in complex with arabinooctaose

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BGH43_Ce5ho9B2 A: beta barrelsX: Lipocalins/StreptavidinH: Barrel domain in extracellular arabinanase (From Topology)T: Barrel domain in extracellular arabinanaseF: GH43_CECOD (1.6)
BabnA_Ige5ho9B3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Ig-like domain in extracellular arabinanase (From Topology)T: Ig-like domain in extracellular arabinanaseF: abnA_IgECOD (1.6)
BGlyco_hydro_43e5ho9B1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 5-bladedF: Glyco_hydro_43ECOD (1.6)
AGH43_Ce5ho9A2 A: beta barrelsX: Lipocalins/StreptavidinH: Barrel domain in extracellular arabinanase (From Topology)T: Barrel domain in extracellular arabinanaseF: GH43_CECOD (1.6)
AabnA_Ige5ho9A3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Ig-like domain in extracellular arabinanase (From Topology)T: Ig-like domain in extracellular arabinanaseF: abnA_IgECOD (1.6)
AGlyco_hydro_43e5ho9A1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 5-bladedF: Glyco_hydro_43ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2 Chain ACATH (4.3.0)
B2.40.128.10 Mainly Beta Beta Barrel Lipocalin CATH (4.3.0)
A2.115.10.20 Mainly Beta 5 Propeller Tachylectin-2 Chain ACATH (utative)
A2.40.128.10 Mainly Beta Beta Barrel Lipocalin CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Extracellular arabinanase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR013320Concanavalin A-like lectin/glucanase domain superfamilyHomologous Superfamily
A, B
IPR050727Glycosyl hydrolase 43 family arabinanasesFamily
A, B
IPR023296Glycosyl hydrolase, five-bladed beta-propeller domain superfamilyHomologous Superfamily
A, B
IPR006558LamG-like jellyroll foldDomain
A, B
IPR046780Atrophied bacterial Ig domainDomain
A, B
IPR006710Glycoside hydrolase, family 43Family
A, B
IPR032291Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminalDomain