X-ray crystal structure of Periplasmic Desferal binding protein FhuD from Vibrio cholerae
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth N] | d5ggyn1 | Alpha and beta proteins (a/b) | Chelatase-like | 'Helical backbone' metal receptor | automated matches | automated matches | (Vibrio cholerae O395 ) [TaxId: 345073 ], | SCOPe (2.08) |
| B [auth N] | d5ggyn2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vibrio cholerae O395 ) [TaxId: 345073 ], | SCOPe (2.08) |
| A | d5ggya1 | Alpha and beta proteins (a/b) | Chelatase-like | 'Helical backbone' metal receptor | automated matches | automated matches | (Vibrio cholerae O395 ) [TaxId: 345073 ], | SCOPe (2.08) |
| A | d5ggya2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vibrio cholerae O395 ) [TaxId: 345073 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth N] | Peripla_BP_2_N | e5ggyN1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| B [auth N] | UNK_F_TYPE | e5ggyN2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: UNK_F_TYPE | ECOD (1.6) |
| A | Peripla_BP_2_N | e5ggyA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: Peripla_BP_2_N | ECOD (1.6) |
| A | UNK_F_TYPE | e5ggyA2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Chelatase-like | F: UNK_F_TYPE | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B [auth N] | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.3.0) |
| A | 3.40.50.1980 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Nitrogenase molybdenum iron protein domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A, B [auth N] | Iron(III) ABC transporter, periplasmic iron-compound-binding protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, B [auth N] | IPR051313 | Bacterial iron-siderophore binding | Family |
| A, B [auth N] | IPR002491 | ABC transporter periplasmic binding domain | Domain |
