5EYI | pdb_00005eyi

Structure of PRRSV apo-NSP11 at 2.16A


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BXendoU_likee5eyiB1 A: a+b complex topologyX: RNase A-likeH: EndoU-like (From Topology)T: EndoU-likeF: XendoU_likeECOD (1.6)
BDUF3470_likee5eyiB2 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: DUF3470_likeECOD (1.6)
AXendoU_likee5eyiA2 A: a+b complex topologyX: RNase A-likeH: EndoU-like (From Topology)T: EndoU-likeF: XendoU_likeECOD (1.6)
ADUF3470_likee5eyiA1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: DUF3470_likeECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Non-structural protein 11

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR008741Arterivirus papain-like cysteine protease alpha (PCPalpha) domainDomain
A, B
IPR025773Arterivirus papain-like cysteine protease beta (PCPbeta) domainDomain
A, B
IPR032785Replicase polyprotein 1ab, peptidase C33-associated domainDomain
A, B
IPR044863Nidovirus RdRp-associated nucleotidyl transferase (NiRAN) domainDomain
A, B
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B
IPR037227Endoribonuclease EndoU-likeHomologous Superfamily
A, B
IPR009003Peptidase S1, PA clanHomologous Superfamily
A, B
IPR054104Nsp1alpha, N-terminal zinc fingerDomain
A, B
IPR032855Arterivirus polyprotein, nsp2, immunogenic regionDomain
A, B
IPR008760Equine arteritis virus peptidase S32Family
A, B
IPR038451Arterivirus nsp7 alpha superfamilyHomologous Superfamily
A, B
IPR027351(+) RNA virus helicase core domainDomain
A, B
IPR023338Arterivirus NSP4 peptidase domainDomain
A, B
IPR008743Arterivirus Nsp2, peptidase C33Domain
A, B
IPR038155Arterivirus papain-like cysteine protease alpha (PCPalpha) domain superfamilyHomologous Superfamily
A, B
IPR001205RNA-directed RNA polymerase, C-terminal domainDomain
A, B
IPR027355Nonstructural protein 10, zinc-binding domain, arterivirusDomain
A, B
IPR046440Arterivirus Nsp11 N-terminal/Coronavirus NSP15 middle domainDomain
A, B
IPR044320NSP11, N-terminal, arterivirusDomain
A, B
IPR043504Peptidase_S1_PA_chymotrypsinUnknown
A, B
IPR038154Arterivirus papain-like cysteine protease beta (PCPbeta) domain superfamilyHomologous Superfamily
A, B
IPR043502DNA/RNA polymerase superfamilyHomologous Superfamily
A, B
IPR044348Nonstructural protein 10, 1B domain, arterivirusDomain
A, B
IPR023183Serine protease, chymotrypsin-like serine protease, C-terminalHomologous Superfamily
A, B
IPR043609NendoU domain, nidovirusDomain
A, B
IPR044314NSP11, NendoU domain, arterivirusDomain
A, B
IPR007094RNA-directed RNA polymerase, catalytic domainDomain
A, B
IPR031932Arterivirus nonstructural protein 7 alphaFamily