5DZY
Protocadherin beta 8 extracellular cadherin domains 1-4
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cadherin-like | 8091874 | 3002049 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Cadherin-like | 8091873 | 3002049 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Cadherin-like | 8091876 | 3002049 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Cadherin-like | 8091875 | 3002049 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cadherin-like | 8091875 | 3002049 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cadherin-like | 8091874 | 3002049 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cadherin-like | 8091876 | 3002049 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cadherin-like | 8091873 | 3002049 | SCOP2B (2022-06-29) |
C | SCOP2 Family | Cadherin | 8050634 | 4007535 | SCOP2 (2022-06-29) |
C | SCOP2 Family | Cadherin | 8091870 | 4007535 | SCOP2 (2022-06-29) |
C | SCOP2 Family | Cadherin | 8091871 | 4007535 | SCOP2 (2022-06-29) |
C | SCOP2 Family | Cadherin | 8091872 | 4007535 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Cadherin-like | 8091873 | 3002049 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Cadherin-like | 8091874 | 3002049 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Cadherin-like | 8091875 | 3002049 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | Cadherin-like | 8091876 | 3002049 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Cadherin-like | 8091874 | 3002049 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cadherin-like | 8091875 | 3002049 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cadherin-like | 8091873 | 3002049 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Cadherin-like | 8091876 | 3002049 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Cadherin-like | 8091874 | 3002049 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Cadherin-like | 8091876 | 3002049 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Cadherin-like | 8091873 | 3002049 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Cadherin-like | 8091875 | 3002049 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Cadherin-like | 8091876 | 3002049 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Cadherin-like | 8091874 | 3002049 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Cadherin-like | 8091875 | 3002049 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Cadherin-like | 8091873 | 3002049 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00028 | e5dzyA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
A | PF08266 | e5dzyA3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
B | PF00028 | e5dzyB4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
B | PF08266 | e5dzyB3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
C | PF00028 | e5dzyC3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
C | PF08266 | e5dzyC2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
D | PF00028 | e5dzyD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
D | PF08266 | e5dzyD4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
E | PF00028 | e5dzyE2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
E | PF08266 | e5dzyE4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
F | PF00028 | e5dzyF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00028 | ECOD (1.6) |
F | PF08266 | e5dzyF3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF08266 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
B | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
C | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
D | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
E | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
F | 2.60.40.60 | Mainly Beta | Sandwich | Immunoglobulin-like | Cadherins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Pcdhb8 protein |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015919 | Cadherin-like superfamily | Homologous Superfamily | |
IPR020894 | Cadherin conserved site | Conserved Site | |
IPR032455 | Cadherin, cytoplasmic C-terminal domain | Domain | |
IPR013164 | Cadherin, N-terminal | Domain | |
IPR002126 | Cadherin-like | Domain |