5ZWI | pdb_00005zwi

Interaction between Vitamin D receptor (VDR) and a ligand having a dienone group


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5zwia_ All alpha proteins Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Vitamin D nuclear receptor Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyNuclear receptor ligand-binding domain 8038686 3001442 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACollar,S_tail_recep_bde5zwiA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.565.10 Mainly Alpha Orthogonal Bundle Retinoid X Receptor Retinoid X ReceptorCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth C]13-meric peptide from DRIP205 NR2 BOX peptide
Vitamin D3 receptor