5ZQ2

SidE apo form

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUNK_F_TYPEe5zq2A3 A: alpha bundlesX: Effector SdeA helical domain (From Topology)H: Effector SdeA helical domain (From Topology)T: Effector SdeA helical domainF: UNK_F_TYPEECOD (1.6)
ASidE_2nde5zq2A1 A: alpha complex topologyX: PDEase-likeH: HD-domain/PDEase-like (From Topology)T: HD-domain/PDEase-likeF: SidE_2ndECOD (1.6)
AUNK_F_TYPEe5zq2A2 A: a+b complex topologyX: ADP-ribosylation (From Topology)H: ADP-ribosylation (From Topology)T: ADP-ribosylationF: UNK_F_TYPEECOD (1.6)
B [auth C]UNK_F_TYPEe5zq2C3 A: alpha bundlesX: Effector SdeA helical domain (From Topology)H: Effector SdeA helical domain (From Topology)T: Effector SdeA helical domainF: UNK_F_TYPEECOD (1.6)
B [auth C]SidE_2nde5zq2C1 A: alpha complex topologyX: PDEase-likeH: HD-domain/PDEase-like (From Topology)T: HD-domain/PDEase-likeF: SidE_2ndECOD (1.6)
B [auth C]UNK_F_TYPEe5zq2C2 A: a+b complex topologyX: ADP-ribosylation (From Topology)H: ADP-ribosylation (From Topology)T: ADP-ribosylationF: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B [auth C]		PF19048SidE mono-ADP-ribosyltransferase domain (SidE_mART)SidE mono-ADP-ribosyltransferase domainThis domain found in the SidE bacterial effector protein mediates the mono-ADP-ribosylation of ubiquitin, which is then ligated to host proteins by the Pfam:PF12252 domain [1].Domain
A,
B [auth C]		PF12252SidE phosphodiesterase (PDE) domain (SidE_PDE)SidE phosphodiesterase (PDE) domainThis entry represents the phosphodiesterase (PDE) domain found in the bacterial ubiquitinating enzymes, which belong to the SidE family. This domain catalyses the conjugation of ADP-ribosylated ubiquitin (ADPR-Ub), previously synthesised by the mono- ...This entry represents the phosphodiesterase (PDE) domain found in the bacterial ubiquitinating enzymes, which belong to the SidE family. This domain catalyses the conjugation of ADP-ribosylated ubiquitin (ADPR-Ub), previously synthesised by the mono-ADP-ribosyltransferase (mART) domain, to a serine residue on substrates to generate a protein-phosphoribosyl-Ub (PR-Ub) product. These pathogen proteins are secreted bacterial effector proteins, which are translocated inside the host cell using the Dot/Icm secretion system [1,2]. The SidE family of enzymes carry out ubiquitination of host cell proteins in an E1/E2-independent manner [2,3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B [auth C]		SidE - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B [auth C]		IPR043935SidE, mono-ADP-ribosyltransferase domainDomain
A,
B [auth C]		IPR021014SidE, PDE domainDomain
A,
B [auth C]		IPR043934SidE, DUB domainDomain