5ZNR
Crystal structure of PtSHL in complex with an H3K27me3 peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PHD,BAH_1 | e5znrA1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PHD,BAH_1 | ECOD (1.6) |
C [auth B] | PHD,BAH_1 | e5znrB1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PHD,BAH_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF01426 | BAH domain (BAH) | BAH domain | This domain has been called BAH (Bromo adjacent homology) domain and has also been called ELM1 and BAM (Bromo adjacent motif) domain. The function of this domain is unknown but may be involved in protein-protein interaction [3]. | Domain |
A, C [auth B] | PF00628 | PHD-finger (PHD) | PHD-finger | PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner to that of the RING and FYVE domains [2]. Several PHD fingers have been identified as binding modules of methylated histone H3 [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B] | IPR001965 | Zinc finger, PHD-type | Domain |
A, C [auth B] | IPR019787 | Zinc finger, PHD-finger | Domain |
A, C [auth B] | IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily |
A, C [auth B] | IPR043151 | Bromo adjacent homology (BAH) domain superfamily | Homologous Superfamily |
A, C [auth B] | IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily |
A, C [auth B] | IPR019786 | Zinc finger, PHD-type, conserved site | Conserved Site |
A, C [auth B] | IPR001025 | Bromo adjacent homology (BAH) domain | Domain |
B [auth P], D [auth Q] | IPR009072 | Histone-fold | Homologous Superfamily |
B [auth P], D [auth Q] | IPR007125 | Histone H2A/H2B/H3 | Domain |
B [auth P], D [auth Q] | IPR000164 | Histone H3/CENP-A | Family |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
B [auth P], D [auth Q] | M3L | Parent Component: LYS :  AA0074 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 |