5ZMO | pdb_00005zmo

Sulfur binding domain of ScoMcrA complexed with phosphorothioated DNA


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUNK_F_TYPEe5zmoA1 A: beta barrelsX: Stalk domain of SBV glycoprotein Gc (From Topology)H: Stalk domain of SBV glycoprotein Gc (From Topology)T: Stalk domain of SBV glycoprotein GcF: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF26340ScoMcrA-like, DNA sulfur-binding domain (DNA-SBD_ScoMcrA)ScoMcrA-like, DNA sulfur-binding domainThis entry represents the DNA sulfur-binding domain (SBD) found in the endonuclease ScoMcrA and related type IV restriction enzymes. This domain recognises the sulfur atom in phosphorothioated DNA (PT-DNA). The recognition of the PT-DNA by SBD is pho ...This entry represents the DNA sulfur-binding domain (SBD) found in the endonuclease ScoMcrA and related type IV restriction enzymes. This domain recognises the sulfur atom in phosphorothioated DNA (PT-DNA). The recognition of the PT-DNA by SBD is phosphorothioate-dependent and also DNA sequence-specific [1,2]. Residues involved in sulfur recognition are highly conserved across homologues. This domain adopts an alpha/beta fold consisting of a small three-stranded beta-sheet elaborated with alpha-helices [1,2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage