Crystal structure of in vitro expressed and assembled PCV2 Virus-like Particle
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| ZA [auth q] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| Z | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| YA [auth p] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| Y | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| XA [auth o] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| X | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| WA [auth n] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| W | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| VA [auth m] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| V | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| UA [auth l] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| U | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| TA [auth k] | SCOP2 Family | Circovirus-like VP | 8097801 | 4006869 | SCOP2 (2022-06-29) |
| TA [auth k] | SCOP2 Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2 (2022-06-29) |
| T | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| SA [auth j] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| S | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| RA [auth i] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| QA [auth h] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| PA [auth g] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| OA [auth f] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| NA [auth e] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| MA [auth d] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| LA [auth c] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| KA [auth b] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| JA [auth a] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| IA [auth 9] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| HB [auth y] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| HA [auth 8] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| GB [auth x] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| GA [auth 7] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| FB [auth w] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| FA [auth 6] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| EB [auth v] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| EA [auth 5] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| DB [auth u] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| DA [auth 4] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| CB [auth t] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| CA [auth 3] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| BB [auth s] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| BA [auth 2] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| AB [auth r] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| AA [auth 1] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8097802 | 3000918 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| ZA [auth q] | Actin | e5zjuq1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| Z | Actin | e5zjuZ1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| YA [auth p] | Actin | e5zjup1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| Y | Actin | e5zjuY1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| XA [auth o] | Actin | e5zjuo1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| X | Actin | e5zjuX1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| WA [auth n] | Actin | e5zjun1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| W | Actin | e5zjuW1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| VA [auth m] | Actin | e5zjum1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| V | Actin | e5zjuV1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| UA [auth l] | Actin | e5zjul1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| U | Actin | e5zjuU1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| TA [auth k] | Actin | e5zjuk1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| T | Actin | e5zjuT1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| SA [auth j] | Actin | e5zjuj1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| S | Actin | e5zjuS1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| RA [auth i] | Actin | e5zjui1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| R | Actin | e5zjuR1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| QA [auth h] | Actin | e5zjuh1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| Q | Actin | e5zjuQ1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| PA [auth g] | Actin | e5zjug1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| P | Actin | e5zjuP1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| OA [auth f] | Actin | e5zjuf1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| O | Actin | e5zjuO1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| NA [auth e] | Actin | e5zjue1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| N | Actin | e5zjuN1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| MA [auth d] | Actin | e5zjud1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| M | Actin | e5zjuM1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| LA [auth c] | Actin | e5zjuc1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| L | NTP_transf_2 | e5zjuL1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: NTP_transf_2 | ECOD (v294.2) |
| KA [auth b] | Actin | e5zjub1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| K | Actin | e5zjuK1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| JA [auth a] | Actin | e5zjua1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| J | Actin | e5zjuJ1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| IA [auth 9] | Actin | e5zju91 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| I | Actin | e5zjuI1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| HB [auth y] | Actin | e5zjuy1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| HA [auth 8] | Actin | e5zju81 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| H | Actin | e5zjuH1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| GB [auth x] | Actin | e5zjux1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| GA [auth 7] | Actin | e5zju71 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| G | Actin | e5zjuG1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| FB [auth w] | Actin | e5zjuw1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| FA [auth 6] | Actin | e5zju61 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| F | Actin | e5zjuF1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| EB [auth v] | Actin | e5zjuv1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| EA [auth 5] | Actin | e5zju51 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| E | Actin | e5zjuE1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| DB [auth u] | Actin | e5zjuu1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| DA [auth 4] | Actin | e5zju41 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| D | Actin | e5zjuD1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| CB [auth t] | Actin | e5zjut1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| CA [auth 3] | Actin | e5zju31 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| C | Actin | e5zjuC1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| BB [auth s] | Actin | e5zjus1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| BA [auth 2] | Actin | e5zju21 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| B | Actin | e5zjuB1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| AB [auth r] | Actin | e5zjur1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| AA [auth 1] | Actin | e5zju11 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
| A | Actin | e5zjuA1 | A: beta barrels | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Actin | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038652 | Circovirus capsid superfamily | Homologous Superfamily | |
| IPR003383 | Circovirus capsid protein | Family |














