Crystal structure of poly(ADP-ribose) glycohydrolase (PARG) from Deinococcus radiodurans in complex with ADP-ribose (P32)
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F [auth D] | Ald_deCOase | e5zdcD1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (v294.1) |
| E [auth L] | Ald_deCOase | e5zdcL1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (v294.1) |
| D [auth J] | Ald_deCOase | e5zdcJ1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (v294.1) |
| C [auth H] | Ald_deCOase | e5zdcH1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (v294.1) |
| B [auth F] | Ald_deCOase | e5zdcF1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (v294.1) |
| A [auth C] | Ald_deCOase | e5zdcC1 | A: a/b three-layered sandwiches | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| F [auth D] | 3.40.220.10 | Alpha Beta | 3-Layer(aba) Sandwich | Leucine Aminopeptidase, subunit E | domain 1 | CATH (utative) |
| E [auth L] | 3.40.220.10 | Alpha Beta | 3-Layer(aba) Sandwich | Leucine Aminopeptidase, subunit E | domain 1 | CATH (utative) |
| D [auth J] | 3.40.220.10 | Alpha Beta | 3-Layer(aba) Sandwich | Leucine Aminopeptidase, subunit E | domain 1 | CATH (utative) |
| C [auth H] | 3.40.220.10 | Alpha Beta | 3-Layer(aba) Sandwich | Leucine Aminopeptidase, subunit E | domain 1 | CATH (utative) |
| B [auth F] | 3.40.220.10 | Alpha Beta | 3-Layer(aba) Sandwich | Leucine Aminopeptidase, subunit E | domain 1 | CATH (utative) |
| A [auth C] | 3.40.220.10 | Alpha Beta | 3-Layer(aba) Sandwich | Leucine Aminopeptidase, subunit E | domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF10021 | Microbial-type PARG, catalytic domain (PARG_cat_microb) | Microbial-type PARG, catalytic domain | Poly(ADP-ribose) glycohydrolase (PARG) hydrolyses the ribose-ribose bonds present in poly(ADP-ribose) (PAR) chains. This entry represents the PARG homologue present in bacteria and fungi. Its structure shows a typical macrodomain folding consisting o ... | Domain |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR043472 | Macro domain-like | Homologous Superfamily | |
| IPR012664 | Conserved hypothetical protein CHP02452 | Family | |
| IPR019261 | Microbial-type PARG, catalytic domain | Domain |
