Annotations: 5ZBO

Cryo-EM structure of PCV2 VLPs

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
ZA [auth q]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
Z	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
YA [auth p]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
Y	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
XA [auth o]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
WA [auth n]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
VA [auth m]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
UA [auth l]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
TA [auth k]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
SA [auth j]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
RA [auth i]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
QA [auth h]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
PA [auth g]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
OA [auth f]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
NA [auth e]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
MA [auth d]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
LA [auth c]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
KA [auth b]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
JA [auth a]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
IA [auth 9]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
HB [auth y]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
HA [auth 8]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
GB [auth x]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
GA [auth 7]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
FB [auth w]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
FA [auth 6]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
EB [auth v]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
EA [auth 5]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
DB [auth u]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
DA [auth 4]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
CB [auth t]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
CA [auth 3]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
BB [auth s]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
BA [auth 2]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
AB [auth r]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
AA [auth 1]	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Positive stranded ssRNA viruses-like	8097802	3000918	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
ZA [auth q]	Actin	e5zboq1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
Z	Actin	e5zboZ1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
YA [auth p]	Actin	e5zbop1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
Y	Actin	e5zboY1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
XA [auth o]	Actin	e5zboo1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
X	Actin	e5zboX1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
WA [auth n]	Actin	e5zbon1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
W	Actin	e5zboW1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
VA [auth m]	Actin	e5zbom1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
V	Actin	e5zboV1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
UA [auth l]	Actin	e5zbol1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
U	Actin	e5zboU1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
TA [auth k]	Actin	e5zbok1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
T	Actin	e5zboT1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
SA [auth j]	Actin	e5zboj1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
S	Actin	e5zboS1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
RA [auth i]	Actin	e5zboi1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
R	Actin	e5zboR1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
QA [auth h]	Actin	e5zboh1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
Q	Actin	e5zboQ1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
PA [auth g]	Actin	e5zbog1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
P	Actin	e5zboP1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
OA [auth f]	Actin	e5zbof1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
O	Actin	e5zboO1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
NA [auth e]	Actin	e5zboe1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
N	Actin	e5zboN1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
MA [auth d]	Actin	e5zbod1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
M	Actin	e5zboM1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
LA [auth c]	Actin	e5zboc1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
L	Actin	e5zboL1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
KA [auth b]	Actin	e5zbob1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
K	Actin	e5zboK1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
JA [auth a]	Actin	e5zboa1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
J	Actin	e5zboJ1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
IA [auth 9]	Actin	e5zbo91	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
I	Actin	e5zboI1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
HB [auth y]	Actin	e5zboy1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
HA [auth 8]	Actin	e5zbo81	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
H	Actin	e5zboH1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
GB [auth x]	Actin	e5zbox1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
GA [auth 7]	Actin	e5zbo71	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
G	Actin	e5zboG1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
FB [auth w]	Actin	e5zbow1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
FA [auth 6]	Actin	e5zbo61	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
F	Actin	e5zboF1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
EB [auth v]	Actin	e5zbov1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
EA [auth 5]	Actin	e5zbo51	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
E	Actin	e5zboE1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
DB [auth u]	Actin	e5zbou1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
DA [auth 4]	Actin	e5zbo41	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
D	Actin	e5zboD1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
CB [auth t]	Actin	e5zbot1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
CA [auth 3]	Actin	e5zbo31	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
C	Actin	e5zboC1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
BB [auth s]	Actin	e5zbos1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
BA [auth 2]	Actin	e5zbo21	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
B	Actin	e5zboB1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
AB [auth r]	Actin	e5zbor1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
AA [auth 1]	Actin	e5zbo11	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)
A	Actin	e5zboA1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Actin	ECOD (v295.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, AA [auth 1], AB [auth r], B, BA [auth 2], A, AA [auth 1], AB [auth r], B, BA [auth 2], BB [auth s], C, CA [auth 3], CB [auth t], D, DA [auth 4], DB [auth u], E, EA [auth 5], EB [auth v], F, FA [auth 6], FB [auth w], G, GA [auth 7], GB [auth x], H, HA [auth 8], HB [auth y], I, IA [auth 9], J, JA [auth a], K, KA [auth b], L, LA [auth c], M, MA [auth d], N, NA [auth e], O, OA [auth f], P, PA [auth g], Q, QA [auth h], R, RA [auth i], S, SA [auth j], T, TA [auth k], U, UA [auth l], V, VA [auth m], W, WA [auth n], X, XA [auth o], Y, YA [auth p], Z, ZA [auth q]	Capsid protein	DNA binding binding nucleic acid binding	virion assembly viral process viral capsid assembly viral life cycle virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell viral penetration into host nucleus virion assembly viral process viral capsid assembly viral life cycle virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host endocytosis involved in viral entry into host cell viral penetration into host nucleus intracellular transport of virus transport of virus	host cellular component cellular anatomical structure host cell other organism part viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host intracellular organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth 1], AB [auth r], B, BA [auth 2], A, AA [auth 1], AB [auth r], B, BA [auth 2], BB [auth s], C, CA [auth 3], CB [auth t], D, DA [auth 4], DB [auth u], E, EA [auth 5], EB [auth v], F, FA [auth 6], FB [auth w], G, GA [auth 7], GB [auth x], H, HA [auth 8], HB [auth y], I, IA [auth 9], J, JA [auth a], K, KA [auth b], L, LA [auth c], M, MA [auth d], N, NA [auth e], O, OA [auth f], P, PA [auth g], Q, QA [auth h], R, RA [auth i], S, SA [auth j], T, TA [auth k], U, UA [auth l], V, VA [auth m], W, WA [auth n], X, XA [auth o], Y, YA [auth p], Z, ZA [auth q]	IPR038652	Circovirus capsid superfamily	Homologous Superfamily
A, AA [auth 1], AB [auth r], B, BA [auth 2], A, AA [auth 1], AB [auth r], B, BA [auth 2], BB [auth s], C, CA [auth 3], CB [auth t], D, DA [auth 4], DB [auth u], E, EA [auth 5], EB [auth v], F, FA [auth 6], FB [auth w], G, GA [auth 7], GB [auth x], H, HA [auth 8], HB [auth y], I, IA [auth 9], J, JA [auth a], K, KA [auth b], L, LA [auth c], M, MA [auth d], N, NA [auth e], O, OA [auth f], P, PA [auth g], Q, QA [auth h], R, RA [auth i], S, SA [auth j], T, TA [auth k], U, UA [auth l], V, VA [auth m], W, WA [auth n], X, XA [auth o], Y, YA [auth p], Z, ZA [auth q]	IPR003383	Circovirus capsid protein	Family