5Z6C | pdb_00005z6c

Crystal structure of Bacillus subtilis sugar-binding protein YesO involved in import of rhamnogalacturonan

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad5z6ca_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Bacillus subtilis subsp. subtilis str. 168 ) [TaxId: 224308 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AC1-sete5z6cA1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: Aconitase iron-sulfur domainT: Aconitase iron-sulfur domainF: C1-setECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.190.10 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01547Bacterial extracellular solute-binding protein (SBP_bac_1)Bacterial extracellular solute-binding protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Putative ABC transporter substrate-binding protein YesO -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR050490Bacterial solute-binding protein 1Family
IPR006059Bacterial-type extracellular solute-binding proteinFamily