Structural insights into the CRISPR-Cas-associated ribonuclease activity of Staphylococcus epidermidis Csm6


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Bubiquitine5yjcB1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ubiquitinECOD (v294.1)
ACas_Csm6_HEPNe5yjcA1 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Cas_Csm6_HEPNECOD (v294.1)
Aubiquitine5yjcA2 A: a/b three-layered sandwichesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ubiquitinECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF22206CRISPR-associated protein Csm6 6H domain (Cas_Csm6_6H)CRISPR-associated protein Csm6 6H domainThis entry includes Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix (6H) domain and a C-terminal HEPN domain at the C-ter ...This entry includes Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix (6H) domain and a C-terminal HEPN domain at the C-terminal, which has RNase activity [1]. This is the 6H domain [1].
Domain
A, B
PF09659Cas_Csm6 HEPN domain (Cas_Csm6_HEPN)Cas_Csm6 HEPN domainThis entry represents the HEPN domain of Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix domain and a C-terminal HEPN dom ...This entry represents the HEPN domain of Csm6 from bacteria (i.e Enterococcus italicus), a Cas (CRISPR-associated) protein from type III-A CRISPR-Cas system. It consists of a CARF domain at the N-terminal, a six-helix domain and a C-terminal HEPN domain at the C-terminal, which has RNase activity [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage