5YI5 | pdb_00005yi5

human ferritin mutant - E-helix deletion


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd5yi5b_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Cd5yi5c_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Hd5yi5h_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Jd5yi5j_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Kd5yi5k_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ld5yi5l_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Md5yi5m_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Pd5yi5p_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Rd5yi5r_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Sd5yi5s_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Xd5yi5x_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Wd5yi5w_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Vd5yi5v_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ud5yi5u_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Td5yi5t_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Qd5yi5q_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Od5yi5o_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Nd5yi5n_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Id5yi5i_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Gd5yi5g_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Fd5yi5f_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ed5yi5e_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Dd5yi5d_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
Ad5yi5a_ All alpha proteins Ferritin-like Ferritin-like automated matches automated matches Human (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
USCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyFerritin-like 8038756 3001658 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BV-sete5yi5B1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
CV-sete5yi5C1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
HV-sete5yi5H1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
JV-sete5yi5J1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
KV-sete5yi5K1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
LV-sete5yi5L1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
MV-sete5yi5M1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
PV-sete5yi5P1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
RV-sete5yi5R1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
SV-sete5yi5S1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
XV-sete5yi5X1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
WV-sete5yi5W1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
VV-sete5yi5V1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
UV-sete5yi5U1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
TV-sete5yi5T1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
QV-sete5yi5Q1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
OV-sete5yi5O1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
NV-sete5yi5N1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
IV-sete5yi5I1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
GV-sete5yi5G1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
FV-sete5yi5F1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
EV-sete5yi5E1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
DV-sete5yi5D1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)
AV-sete5yi5A1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
C1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
H1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
J1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
K1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
L1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
M1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
P1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
R1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
S1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
X1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
W1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
V1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
U1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
T1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
Q1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
O1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
N1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
I1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
G1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
F1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
E1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
D1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)
A1.20.1260.10 Mainly Alpha Up-down Bundle Ferritin Ferritin, core subunit, four-helix bundleCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF00210Ferritin-like domain (Ferritin)Ferritin-like domainThis family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Ferritin heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR009040Ferritin-like diiron domainDomain
A, B, C, D, E
IPR012347Ferritin-likeHomologous Superfamily
A, B, C, D, E
IPR009078Ferritin-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR008331Ferritin/DPS domainDomain
A, B, C, D, E
IPR001519FerritinFamily
A, B, C, D, E
IPR014034Ferritin, conserved siteConserved Site