5Y4C | pdb_00005y4c

Crystal structure of EfeO-like protein Algp7 in complex with a metal ion

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Imelysin domain-like	8052611	3002130	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Imelysin domain-like	8052612	3002130	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	LAMTOR5	e5y4cA1	A: a/b three-layered sandwiches	X: TIM beta/alpha-barrel	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: LAMTOR5	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.20.1420.20	Mainly Alpha	Up-down Bundle	A middle domain of Talin 1	M75 peptidase, HXXE motif	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Alginate-binding protein	cation binding ion binding binding metal ion binding small molecule binding	-	cellular anatomical structure cell envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR018976	Imelysin-like domain	Domain
A	IPR053377	Iron uptake and transport EfeM/EfeO	Family
A	IPR050894	Iron uptake system component EfeM/EfeO	Family
A	IPR034981	EfeO/Algp7, imelysin-like domain	Domain
A	IPR038352	Imelysin-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.