5XWP
Crystal structure of LbuCas13a-crRNA-target RNA ternary complex
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF08107 | e5xwpA5 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: EUF08107 | ECOD (1.6) |
A | UNK_F_TYPE | e5xwpA4 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: UNK_F_TYPE | ECOD (1.6) |
A | DUF4091 | e5xwpA3 | A: alpha bundles | X: CRISPR-Cas system second helical domain (From Homology) | H: CRISPR-Cas system second helical domain | T: CRISPR-Cas system RNase C2c2 second helical domain | F: DUF4091 | ECOD (1.6) |
A | UNK_F_TYPE | e5xwpA1 | A: alpha bundles | X: CRISPR-Cas system RNase C2c2 N-terminal domain (From Topology) | H: CRISPR-Cas system RNase C2c2 N-terminal domain (From Topology) | T: CRISPR-Cas system RNase C2c2 N-terminal domain | F: UNK_F_TYPE | ECOD (1.6) |
A | UNK_F_TYPE | e5xwpA2 | A: alpha bundles | X: CRISPR-Cas system first helical domain (From Homology) | H: CRISPR-Cas system first helical domain | T: CRISPR-Cas system RNase C2c2 first helical domain | F: UNK_F_TYPE | ECOD (1.6) |
F [auth B] | EUF08107 | e5xwpB2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: EUF08107 | ECOD (1.6) |
F [auth B] | UNK_F_TYPE | e5xwpB4 | A: alpha bundles | X: Four-helical up-and-down bundle | H: HEPN | T: Nucleotidyltransferase substrate binding subunit/domain | F: UNK_F_TYPE | ECOD (1.6) |
F [auth B] | DUF4091 | e5xwpB3 | A: alpha bundles | X: CRISPR-Cas system second helical domain (From Homology) | H: CRISPR-Cas system second helical domain | T: CRISPR-Cas system RNase C2c2 second helical domain | F: DUF4091 | ECOD (1.6) |
F [auth B] | UNK_F_TYPE | e5xwpB1 | A: alpha bundles | X: CRISPR-Cas system RNase C2c2 N-terminal domain (From Topology) | H: CRISPR-Cas system RNase C2c2 N-terminal domain (From Topology) | T: CRISPR-Cas system RNase C2c2 N-terminal domain | F: UNK_F_TYPE | ECOD (1.6) |
F [auth B] | UNK_F_TYPE | e5xwpB5 | A: alpha bundles | X: CRISPR-Cas system first helical domain (From Homology) | H: CRISPR-Cas system first helical domain | T: CRISPR-Cas system RNase C2c2 first helical domain | F: UNK_F_TYPE | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, F [auth B] | Uncharacterized protein |
| - | |
B [auth C], D [auth E] | RNA (59-MER) | - | - | - |
C [auth D], E [auth F] | RNA (30-MER) | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, F [auth B] | IPR053395 | CRISPR-associated endoribonuclease Cas13a | Family |