Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DGlyco_transf_4e5xfmD1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: Glyco_transf_4ECOD (v294.1)
CGlyco_transf_4e5xfmC1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: Glyco_transf_4ECOD (v294.1)
BGlyco_transf_4e5xfmB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: Glyco_transf_4ECOD (v294.1)
AV-sete5xfmA1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: V-setECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF14508Glycosyl-hydrolase 97 N-terminal (GH97_N)Glycosyl-hydrolase 97 N-terminalThis N-terminal domain of glycosyl-hydrolase-97 [1]contributes part of the active site pocket. It is also important for contact with the catalytic and C-terminal domains of the whole [2,3]. Domain
A, B, C, D
PF14509Glycosyl-hydrolase 97 C-terminal, oligomerisation (GH97_C)Glycosyl-hydrolase 97 C-terminal, oligomerisationGlycosyl-hydrolase-97 is made up of three tightly linked and highly conserved globular domains. The C-terminal domain is found to be necessary for oligomerisation of the whole molecule in order to create the active-site pocket and the Ca++-binding s ...Glycosyl-hydrolase-97 is made up of three tightly linked and highly conserved globular domains. The C-terminal domain is found to be necessary for oligomerisation of the whole molecule in order to create the active-site pocket and the Ca++-binding site.
Domain
A, B, C, D
PF10566Glycoside hydrolase 97 (Glyco_hydro_97)Glycoside hydrolase 97This domain is the catalytic region of the bacterial glycosyl-hydrolase family 97. This central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-termina ...This domain is the catalytic region of the bacterial glycosyl-hydrolase family 97. This central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, form two additional non-catalytic domains [1]. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands [2,3].
Domain