5XBT | pdb_00005xbt

The structure of BrlR bound to c-di-GMP


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BReprolysine5xbtB1 A: a/b three-layered sandwichesX: Phosphorylase/hydrolase-likeH: Peptidyl-tRNA hydrolase-likeT: Peptidyl-tRNA hydrolase-likeF: ReprolysinECOD (v294.1)
ATBPe5xbtA1 A: a/b three-layered sandwichesX: Phosphorylase/hydrolase-likeH: Ribosomal protein S5 domain 2-likeT: Ribosomal protein S5 domain 2-likeF: TBPECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.80.10 Alpha Beta Alpha-Beta Barrel Multidrug-efflux Transporter 1 Regulator Bmrr Chain ACATH (utative)
A3.20.80.10 Alpha Beta Alpha-Beta Barrel Multidrug-efflux Transporter 1 Regulator Bmrr Chain ACATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF14526Integron-associated effector binding protein (Cass2)Integron-associated effector binding proteinThis family contains Cass2 from Vibrio cholerae, an integron-associated protein that has been shown [1] to bind cationic drug compounds with submicromolar affinity. Cass2 has been proposed to be representative of a larger family of independent effect ...This family contains Cass2 from Vibrio cholerae, an integron-associated protein that has been shown [1] to bind cationic drug compounds with submicromolar affinity. Cass2 has been proposed to be representative of a larger family of independent effector-binding proteins associated with lateral gene transfer within Vibrio and other closely-related species.
Domain
A, B
PF00376MerR family regulatory protein (MerR)MerR family regulatory protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Probable transcriptional regulator