5X6C | pdb_00005x6c

Crystal structure of SepRS-SepCysE from Methanocaldococcus jannaschii


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BATP-synt_Epse5x6cB1 A: a/b three-layered sandwichesX: Periplasmic binding protein-like IIH: Rubredoxin-relatedT: Tetrapyrrole methylase C-terminal domainF: ATP-synt_EpsECOD (v294.1)
ARuBisCO_large_Ne5x6cA1 A: a/b three-layered sandwichesX: Protein kinase/SAICAR synthase/ATP-graspH: Protein kinase/SAICAR synthase/ATP-graspT: Undecaprenyl diphosphate synthaseF: RuBisCO_large_NECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth E],
D [auth F]
PF09873SepCysE-like (SepCysE)SepCysE-like- Family
A, B
PF01409tRNA synthetases class II core domain (F) (tRNA-synt_2d)tRNA synthetases class II core domain (F)Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only phenylalanyl-tRNA synthetases. This is the core catalytic domain. Domain
A, B
PF18006O-phosphoseryl-tRNA synthetase C-terminal domain (SepRS_C)O-phosphoseryl-tRNA synthetase C-terminal domainThe SSHS domain is mainly found in Archaea. The domain makes up part of the anticodon binding domain at the C-terminal of O-phosphoserine--tRNA(Cys) ligase [1,2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth E],
D [auth F]
Uncharacterized protein MJ1481- - -
A, B
O-phosphoserine--tRNA(Cys) ligase