5X5Y
A membrane protein complex
External Resource: Annotation
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF00005,PF12399 | e5x5yB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00005,PF12399 | ECOD (1.6) |
B [auth A] | PF00005,PF12399 | e5x5yA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00005,PF12399 | ECOD (1.6) |
C [auth G] | PF03739 | e5x5yG2 | A: beta meanders | X: Periplasmic lipopolysaccharide transport protein LptA (YhbN) (From Topology) | H: Periplasmic lipopolysaccharide transport protein LptA (YhbN) (From Topology) | T: Periplasmic lipopolysaccharide transport protein LptA (YhbN) | F: PF03739 | ECOD (1.6) |
C [auth G] | PF03739 | e5x5yG1 | A: alpha bundles | X: Type II ABC exporter transmembrane domain fold | H: Type II ABC exporter transmembrane domain-related | T: ABCG5/ABCG8 transmembrane domain | F: PF03739 | ECOD (1.6) |
D [auth F] | PF03739 | e5x5yF2 | A: beta meanders | X: Periplasmic lipopolysaccharide transport protein LptA (YhbN) (From Topology) | H: Periplasmic lipopolysaccharide transport protein LptA (YhbN) (From Topology) | T: Periplasmic lipopolysaccharide transport protein LptA (YhbN) | F: PF03739 | ECOD (1.6) |
D [auth F] | PF03739 | e5x5yF1 | A: alpha bundles | X: Type II ABC exporter transmembrane domain fold | H: Type II ABC exporter transmembrane domain-related | T: ABCG5/ABCG8 transmembrane domain | F: PF03739 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
B [auth A] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF12399 | Branched-chain amino acid ATP-binding cassette transporter (BCA_ABC_TP_C) | Branched-chain amino acid ATP-binding cassette transporter | This domain family is found in bacteria, archaea and eukaryotes, and is approximately 30 amino acids in length. The family is found in association with Pfam:PF00005. There is a conserved AYLG sequence motif. This family is the C terminal of an ATP de ... | Domain |
A [auth B], B [auth A] | PF00005 | ABC transporter (ABC_tran) | ABC transporter | ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ... | Domain |
C [auth G] | PF03739 | Lipopolysaccharide export system permease LptF/LptG (LptF_LptG) | Lipopolysaccharide export system permease LptF/LptG | - | Family |
D [auth F] | PF03739 | Lipopolysaccharide export system permease LptF/LptG (LptF_LptG) | Lipopolysaccharide export system permease LptF/LptG | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | ABC transporters | LPS export ABC transporter LPTF/G permease |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |