5WVZ | pdb_00005wvz

The crystal structure of Cren7 mutant L28F in complex with dsDNA

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Zinc beta-ribbon	8102746	3001238	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Zinc beta-ribbon	8102746	3001238	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Carot_N	e5wvzB1	A: alpha bundles	X: HAD domain-like	H: beta-propeller	T: 8-bladed	F: Carot_N	ECOD (develop294)
A	Carot_N	e5wvzA1	A: alpha bundles	X: HAD domain-like	H: beta-propeller	T: 8-bladed	F: Carot_N	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.30.30.610	Mainly Beta	Roll	SH3 type barrels.	Chromatin protein Cren7	CATH (4.3.0)
A	2.30.30.610	Mainly Beta	Roll	SH3 type barrels.	Chromatin protein Cren7	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF11520	Chromatin protein Cren7 (Cren7)	Chromatin protein Cren7	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, D, E, F	DNA (5'-D(GPCPGPAPTPCPGPC)-3')	-	-	-
A, B	Chromatin protein Cren7	DNA binding double-stranded DNA binding binding nucleic acid binding	-	intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromosome cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR020906	Double-stranded DNA-binding Cren7	Family
A, B	IPR038647	Cren7 superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.