5WQ3
Crystal structure of type-II LOG from Corynebacterium glutamicum
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d5wq3a_ | Alpha and beta proteins (a/b) | MCP/YpsA-like | MCP/YpsA-like | automated matches | automated matches | (Corynebacterium glutamicum ) [TaxId: 1718 ], | SCOPe (2.08) |
B | d5wq3b_ | Alpha and beta proteins (a/b) | MCP/YpsA-like | MCP/YpsA-like | automated matches | automated matches | (Corynebacterium glutamicum ) [TaxId: 1718 ], | SCOPe (2.08) |
C | d5wq3c_ | Alpha and beta proteins (a/b) | MCP/YpsA-like | MCP/YpsA-like | automated matches | automated matches | (Corynebacterium glutamicum ) [TaxId: 1718 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | MoCo carrier protein-like | 8061800 | 4001074 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | MCP/YpsA-like | 8061801 | 3000672 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | MCP/YpsA-like | 8061801 | 3000672 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | MCP/YpsA-like | 8061801 | 3000672 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Lysine_decarbox | e5wq3A1 | A: a/b three-layered sandwiches | X: MCP/YpsA-related (From Topology) | H: MCP/YpsA-related (From Topology) | T: MCP/YpsA-related | F: Lysine_decarbox | ECOD (1.6) |
B | Lysine_decarbox | e5wq3B1 | A: a/b three-layered sandwiches | X: MCP/YpsA-related (From Topology) | H: MCP/YpsA-related (From Topology) | T: MCP/YpsA-related | F: Lysine_decarbox | ECOD (1.6) |
C | Lysine_decarbox | e5wq3C1 | A: a/b three-layered sandwiches | X: MCP/YpsA-related (From Topology) | H: MCP/YpsA-related (From Topology) | T: MCP/YpsA-related | F: Lysine_decarbox | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
B | 3.40.50.450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) | |
C | 3.40.50.450 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03641 | Possible lysine decarboxylase (Lysine_decarbox) | Possible lysine decarboxylase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Cytokinin riboside 5'-monophosphate phosphoribohydrolase |
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InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR005269 | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG | Family | |
IPR031100 | LOG family | Family | |
IPR052341 | LOG family pyrimidine/purine nucleotide 5'-monophosphatases | Family |