Annotations: 5WLN

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E [auth C]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
G [auth E]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
I [auth H]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
N [auth M]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
O [auth N]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
M [auth L]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
L [auth K]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
J [auth I]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
H [auth F]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
F [auth D]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
D [auth B]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
C [auth A]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
B [auth O]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)
A [auth G]	SCOP2B Superfamily	Secretin repeat domain-like	8057216	3002387	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E [auth C]	Peptidase_S26	e5wlnC1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
G [auth E]	Peptidase_S26	e5wlnE1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
I [auth H]	Peptidase_S26	e5wlnH1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
N [auth M]	Peptidase_S26	e5wlnM1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
O [auth N]	Peptidase_S26	e5wlnN1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
M [auth L]	Peptidase_S26	e5wlnL1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
L [auth K]	Peptidase_S26	e5wlnK1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
K [auth J]	Peptidase_S26	e5wlnJ1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
J [auth I]	Peptidase_S26	e5wlnI1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
H [auth F]	Peptidase_S26	e5wlnF1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
F [auth D]	Peptidase_S26	e5wlnD1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
D [auth B]	Peptidase_S26	e5wlnB1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
C [auth A]	Peptidase_S26	e5wlnA1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
B [auth O]	Peptidase_S26	e5wlnO1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)
A [auth G]	Peptidase_S26	e5wlnG1	A: alpha bundles	X: TIM beta/alpha-barrel	H: TIM barrels	T: TIM barrels	F: Peptidase_S26	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E [auth C]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
G [auth E]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
I [auth H]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
N [auth M]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
O [auth N]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
M [auth L]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
L [auth K]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
K [auth J]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (4.3.0)
J [auth I]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
H [auth F]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
F [auth D]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
D [auth B]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
C [auth A]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
B [auth O]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)
A [auth G]	3.30.1370.120	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	PF03958	Bacterial type II/III secretion system short domain (Secretin_N)	Bacterial type II/III secretion system short domain	This is a short, often repeated, domain found in bacterial type II/III secretory system proteins. All previous NolW-like domains fall into this family.	Domain
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	PF00263	Bacterial type II and III secretion system protein (Secretin)	Bacterial type II and III secretion system protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	Type II secretion system protein D	identical protein binding protein binding binding	establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion establishment of localization protein localization to extracellular region localization secretion by cell protein transport macromolecule localization cellular process intracellular protein localization protein transport across the cell outer membrane protein secretion by the type II secretion system transmembrane transport protein transmembrane transport	protein-containing complex type II protein secretion system complex cell periphery cell outer membrane cellular anatomical structure external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	IPR050810	Bacterial Secretion System Channel Protein	Family
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	IPR005644	NolW-like	Domain
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	IPR004846	Type II/III secretion system, secretin-like domain	Domain
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	IPR038591	NolW-like superfamily	Homologous Superfamily
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	IPR049371	GspD-like, N0 domain	Domain
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	IPR004845	Type II secretion system protein GspD, conserved site	Conserved Site
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	IPR013356	Type II secretion system protein GspD	Family
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	IPR001775	GspD/PilQ family	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C] A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	OPM	Transmembrane	Beta-barrel transmembrane	Outer bacterial membrane secretin	Outer bacterial membrane secretion

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth G], B [auth O], C [auth A], D [auth B], E [auth C] A [auth G], B [auth O], C [auth A], D [auth B], E [auth C], F [auth D], G [auth E], H [auth F], I [auth H], J [auth I], K [auth J], L [auth K], M [auth L], N [auth M], O [auth N]	PDBTM	Annotated as membrane protein by PDBTM

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.